RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 PLD4Q96BZ4 506 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 TMEM169Q96HH4 297 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 VPS35Q96QK1 796 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 AGAP2Q99490 1192 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 DDX50Q9BQ39 737 aaKnown RBP7.54□□□□□ -1.2
TRIM42-201ENST00000286349 CLSTN3Q9BQT9 956 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 NUSAP1Q9BXS6 441 aaKnown RBP7.54□□□□□ -1.2
TRIM42-201ENST00000286349 POLR1EQ9GZS1 481 aaKnown RBP7.54□□□□□ -1.2
TRIM42-201ENST00000286349 ZBP1Q9H171 429 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 MAGEH1Q9H213 219 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 NOL6Q9H6R4 1146 aaKnown RBP7.54□□□□□ -1.2
TRIM42-201ENST00000286349 TLE6Q9H808 572 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 SLC28A3Q9HAS3 691 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 NMRAL1Q9HBL8 299 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 TREX1Q9NSU2 369 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 SLC17A6Q9P2U8 582 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 HAO1Q9UJM8 370 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 LRCH1Q9Y2L9 728 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 SLC27A5Q9Y2P5 690 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 CDY1Q9Y6F8 540 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 TRANK1O15050 2925 aa7.54□□□□□ -1.2
TRIM42-201ENST00000286349 A0A087X1B8 175 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GOLGA8QA0A0J9YX86 632 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CCDC195A0A1B0GUA6 201 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GOLGA8OA6NCC3 632 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 EIF4E1BA6NMX2 242 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 HIDE1A8MVS5 230 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GOLGA8NF8WBI6 632 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 PMPCBO75439 489 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 VNN2O95498 520 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GUCA1CO95843 209 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GSRP00390 522 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 C2P06681 752 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 SERPINA6P08185 405 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 HOXB8P17481 243 aaPredicted RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 TACR2P21452 398 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 OR1E1P30953 314 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 PPM1AP35813 382 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 RXRGP48443 463 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ARCN1P48444 511 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 PTDSS1P48651 473 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CSRP3P50461 194 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GALK1P51570 392 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GPR85P60893 370 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ABCE1P61221 599 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 POU4F1Q01851 419 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CSTF3Q12996 717 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GPM6BQ13491 265 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 SERINC3Q13530 473 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 USP10Q14694 798 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 POU6F1Q14863 301 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 AADACL4Q5VUY2 407 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 RAP1GAP2Q684P5 730 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 PDE12Q6L8Q7 609 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 IDO2Q6ZQW0 420 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ZNF354CQ86Y25 554 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CDH26Q8IXH8 852 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 C2CD4AQ8NCU7 369 aaPredicted RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ZNF540Q8NDQ6 660 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 PIP4K2CQ8TBX8 421 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GDPD5Q8WTR4 605 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 EME1Q96AY2 570 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 TADA1Q96BN2 335 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CNDP2Q96KP4 475 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ART5Q96L15 291 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 HS6ST2Q96MM7 605 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CDRT15Q96T59 188 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 C9orf16Q9BUW7 83 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ZNF576Q9H609 170 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 RNPEPL1Q9HAU8 725 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 NT5MQ9NPB1 228 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 DNAJC28Q9NX36 388 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 TMEM216Q9P0N5 145 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ZNF624Q9P2J8 865 aaPredicted RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 REV1Q9UBZ9 1251 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 AFF4Q9UHB7 1163 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CLEC4AQ9UMR7 237 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 APOBEC2Q9Y235 224 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 KIAA1671Q9BY89 1806 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GBF1Q92538 1859 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 TYW5A2RUC4 315 aaKnown RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 A8MVJ9 347 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 NDUFA2O43678 99 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 GREM1O60565 184 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 PRAMEF11O60813 436 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 TRIM13O60858 407 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CXCL14O95715 111 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 IFNA14P01570 189 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 PDHA1P08559 390 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 T-ENOLP0DO92 83 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CTSAP10619 480 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ESRRAP11474 423 aaPredicted RBP7.53□□□□□ -1.2
TRIM42-201ENST00000286349 STMN1P16949 149 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 HLA-DPA1P20036 260 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 SLC12A2P55011 1212 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 AQP5P55064 265 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 CDH4P55283 916 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 ITKQ08881 620 aa7.53□□□□□ -1.2
TRIM42-201ENST00000286349 RFTN1Q14699 578 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms