RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 ARL5BQ96KC2 179 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 VAT1Q99536 393 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 MCMBPQ9BTE3 642 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 TUT1Q9H6E5 874 aaKnown RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 A2MP01023 1474 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 CYP1A1P04798 512 aaPredicted RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 TUBP50607 506 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 POLR2HP52434 150 aaKnown RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 NAA20P61599 178 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 PTPRNQ16849 979 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 CEP97Q8IW35 865 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 ESX1Q8N693 406 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 HM13Q8TCT9 377 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 NOL11Q9H8H0 719 aaKnown RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 SMPD4Q9NXE4 827 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 FUT4P22083 530 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 ACVR2AP27037 513 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 PIK3CBP42338 1070 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 PPIL2Q13356 520 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 FSCN1Q16658 493 aaKnown RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 RBM20Q5T481 1227 aaKnown RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 CLEC10AQ8IUN9 316 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 ITFG2Q969R8 447 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 POLR3BQ9NW08 1133 aaPredicted RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 GDAP2Q9NXN4 497 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 RIDAP52758 137 aaKnown RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 HLFQ16534 295 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 TRAPPC12Q8WVT3 735 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 CPT1BQ92523 772 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 AP2M1Q96CW1 435 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 LDAHQ9H6V9 325 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 RNPEPL1Q9HAU8 725 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 CDHR5Q9HBB8 845 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 FZD3Q9NPG1 666 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 COMMD3Q9UBI1 195 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 COMMD3-BMI1R4GMX3 469 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 CTTNBP2Q8WZ74 1663 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 SH3PXD2BA1X283 911 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 IL1BP01584 269 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 GLDCP23378 1020 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 PSEN1P49768 467 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 EIF2B1Q14232 305 aaKnown RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 SGCBQ16585 318 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 XKR3Q5GH77 459 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 ZNF808Q8N4W9 903 aaPredicted RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 SUSD6Q92537 303 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 PCDHGA12O60330 932 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 PEX11AO75192 247 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 ENTPD5O75356 428 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 ABCG1P45844 678 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 GRAPQ13588 217 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 BCL2A1Q16548 175 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 NYAP1Q6ZVC0 841 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 DEFB128Q7Z7B8 93 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 C2orf73Q8N5S3 287 aaPredicted RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 GRAPLQ8TC17 118 aaPredicted RBP15.68■□□□□ 0.1
UBR3-201ENST00000272793 MSANTD3Q96H12 275 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 ABI3Q9P2A4 366 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 WASF3Q9UPY6 502 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 EFCAB9A8MZ26 197 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 ANGPTL7O43827 346 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 PSMD10O75832 226 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 RHOP08100 348 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 GPD2P43304 727 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 HMGCS2P54868 508 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 ADIGQ0VDE8 80 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 PDIA5Q14554 519 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 TMC7Q7Z402 723 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 UPF1Q92900 1129 aaKnown RBP eCLIP15.68■□□□□ 0.1
UBR3-201ENST00000272793 NINJ1Q92982 152 aa15.68■□□□□ 0.1
UBR3-201ENST00000272793 KCNK1O00180 336 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 RP2O75695 350 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 PDYNP01213 254 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 PSEN2P49810 448 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 CDK16Q00536 496 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 E2F1Q01094 437 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 FSTL1Q12841 308 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 NFE2L1Q14494 772 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 ACBD4Q8NC06 268 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 CMPK1P30085 196 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 RORCP51449 518 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 HERV-K104P61576 105 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 KCNJ2P63252 427 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 TTI2Q6NXR4 508 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 KLHL35Q6PF15 583 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 ZNF570Q96NI8 536 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 C3orf14Q9HBI5 128 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 PDE2AO00408 941 aaPredicted RBP15.67■□□□□ 0.1
UBR3-201ENST00000272793 IGFBP1P08833 259 aaPredicted RBP15.67■□□□□ 0.1
UBR3-201ENST00000272793 LRRC37A5PQ49AS3 106 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 LRRN1Q6UXK5 716 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 CCNB1IP1Q9NPC3 277 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 DNAJC13O75165 2243 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 RPTORQ8N122 1335 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 A0A087X0B3 334 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 FXR2P51116 673 aaKnown RBP eCLIP15.67■□□□□ 0.11e-6■□□□□ 9.7
UBR3-201ENST00000272793 TBX4P57082 545 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 TLE1Q04724 770 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 ZNF527Q8NB42 609 aa15.67■□□□□ 0.1
UBR3-201ENST00000272793 OR52J3Q8NH60 311 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms