RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 C6orf52Q5T4I8 152 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 GPR180Q86V85 440 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 GALNT13Q8IUC8 556 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 SPATA13Q96N96 652 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 GPR20Q99678 358 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 MTMR10Q9NXD2 777 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 DNAJC13O75165 2243 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 TSPAN3O60637 253 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 CLDN11O75508 207 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 RECQL4O94761 1208 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 PLGP00747 810 aaPredicted RBP13.19□□□□□ -0.3
PRDM16-201ENST00000270722 SV2AQ7L0J3 742 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 SFRP1Q8N474 314 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 CHP1Q99653 195 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 TMEM121Q9BTD3 319 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 MUC13Q9H3R2 512 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 CEMIPQ8WUJ3 1361 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 IFNA17P01571 189 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 RPL14P50914 215 aaKnown RBP13.19□□□□□ -0.3
PRDM16-201ENST00000270722 DPYSQ14117 519 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 ADAM32Q8TC27 787 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 ADAMTS15Q8TE58 950 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 SLC22A18Q96BI1 424 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 NUDT16L1Q9BRJ7 211 aaKnown RBP13.19□□□□□ -0.3
PRDM16-201ENST00000270722 MEMO1Q9Y316 297 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 PCDHB1Q9Y5F3 818 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 PCDHGB2Q9Y5G2 931 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 METTL18O95568 372 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 ELF3P78545 371 aaPredicted RBP13.19□□□□□ -0.3
PRDM16-201ENST00000270722 FAXCQ5TGI0 409 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 PSTKQ8IV42 348 aaKnown RBP13.19□□□□□ -0.3
PRDM16-201ENST00000270722 C15orf40Q8WUR7 153 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 FAM136AQ96C01 138 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 ZNF514Q96K75 400 aaPredicted RBP13.19□□□□□ -0.3
PRDM16-201ENST00000270722 RDH8Q9NYR8 311 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 AP1M2Q9Y6Q5 423 aa13.19□□□□□ -0.3
PRDM16-201ENST00000270722 TRIP11Q15643 1979 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 RIIAD1A6NNX1 92 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 TULP2O00295 520 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PSD2Q9BQI7 771 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PRDM15P57071 1507 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 A0A087X0B3 334 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PCDHGA12O60330 932 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 NDUFS1P28331 727 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 FMO4P31512 558 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 HSD17B2P37059 387 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 ALDH5A1P51649 535 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 MANFP55145 182 aaKnown RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 STXBP1P61764 594 aaKnown RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 CFAP206Q8IYR0 622 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 KIAA1143Q96AT1 154 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 NXNL1Q96CM4 212 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PDCD2LQ9BRP1 358 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 TTPALQ9BTX7 342 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 CCDC106Q9BWC9 280 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 RRAGCQ9HB90 399 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PCDHB16Q9NRJ7 776 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 GRIP1Q9Y3R0 1128 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PPEF2O14830 753 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PIGNO95427 931 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PARGQ86W56 976 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 ZC3HC1Q86WB0 502 aaKnown RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 WDSUB1Q8N9V3 476 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 ATXN2LQ8WWM7 1075 aaKnown RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 IKZF3Q9UKT9 509 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 RAB26Q9ULW5 256 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 SUV39H1O43463 412 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 MPZL2O60487 215 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PLIN3O60664 434 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 CMPK1P30085 196 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 NME5P56597 212 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 FGL2Q14314 439 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PLA2G4EQ3MJ16 856 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 GPRC6AQ5T6X5 926 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 MSANTD2Q6P1R3 559 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 TMEM53Q6P2H8 277 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 RANBP3LQ86VV4 465 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 TCEAL4Q96EI5 215 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 LRMDAQ9H2I8 198 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 DNAJC28Q9NX36 388 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 GLI2P10070 1586 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 ILVBLA1L0T0 632 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 PEX12O00623 359 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 TRAFD1O14545 582 aaPredicted RBP13.18□□□□□ -0.3
PRDM16-201ENST00000270722 LARGE1O95461 756 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 AGXTP21549 392 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 USP46P62068 366 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 MON1AQ86VX9 555 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 HPS6Q86YV9 775 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 COPS4Q9BT78 406 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 CASZ1Q86V15 1759 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 COL1A2P08123 1366 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 CHD1O14646 1710 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 LRIG2O94898 1065 aa13.18□□□□□ -0.3
PRDM16-201ENST00000270722 TGM6O95932 706 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms