RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 AP4S1Q9Y587 144 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 PCDHGB5Q9Y5G0 923 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 PLXNA4Q9HCM2 1894 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 ZNF839A8K0R7 811 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 SYCE1LA8MT33 242 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 BBIP1A8MTZ0 92 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 STX7O15400 261 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 DENRO43583 198 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 CSPG5O95196 566 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 HGFP14210 728 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 LBPP18428 481 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 POLE2P56282 527 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 TRAP1Q12931 704 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 GK3PQ14409 553 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 TAF12Q16514 161 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 USP41Q3LFD5 358 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 LIN52Q52LA3 116 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 ADGRF1Q5T601 910 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 NAIF1Q69YI7 327 aaPredicted RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 DEFB128Q7Z7B8 93 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 NKAPQ8N5F7 415 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 PCYOX1LQ8NBM8 494 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 TCF12Q99081 682 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 ADGRE3Q9BY15 652 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 RETREG1Q9H6L5 497 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 IL23AQ9NPF7 189 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 UBAP1Q9NZ09 502 aa12.8□□□□□ -0.36
CPSF6-201ENST00000266679 CNOT6Q9ULM6 557 aaKnown RBP12.8□□□□□ -0.36
CPSF6-201ENST00000266679 ANGPT2O15123 496 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 AHCYL1O43865 530 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 TBL1XO60907 577 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 C1RP00736 705 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 FESP07332 822 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 MZF1P28698 734 aaPredicted RBP12.79□□□□□ -0.36
CPSF6-201ENST00000266679 PRDX3P30048 256 aaKnown RBP12.79□□□□□ -0.36
CPSF6-201ENST00000266679 RHDQ02161 417 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 TWF1Q12792 350 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 KIAA1841Q6NSI8 718 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 KLHDC10Q6PID8 442 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 SCIMPQ6UWF3 145 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 TAS2R42Q7RTR8 314 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 SYVN1Q86TM6 617 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 HERC6Q8IVU3 1022 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 CPNE9Q8IYJ1 553 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 CRIPAKQ8N1N5 446 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 TTC30BQ8N4P2 665 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
CPSF6-201ENST00000266679 PIP4K2CQ8TBX8 421 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 ESAMQ96AP7 390 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 SLCO4A1Q96BD0 722 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 ROPN1LQ96C74 230 aa12.79□□□□□ -0.36
CPSF6-201ENST00000266679 TCRBV3S1A0A5B6 114 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 ANKRD66B4E2M5 251 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 NME4O00746 187 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 CD160O95971 181 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 SMIM18P0DKX4 95 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 CHRM3P20309 590 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 ATP6V1B2P21281 511 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 ALDH7A1P49419 539 aaKnown RBP12.78□□□□□ -0.36
CPSF6-201ENST00000266679 TTPAP49638 278 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 CAPRIN1Q14444 709 aaKnown RBP12.78□□□□□ -0.36
CPSF6-201ENST00000266679 RPS6KA2Q15349 733 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 ATXN7L2Q5T6C5 722 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-201ENST00000266679 THEMIS2Q5TEJ8 643 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 UGT3A1Q6NUS8 523 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 TTC16Q8NEE8 873 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 CD200R1Q8TD46 325 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 ZNF483Q8TF39 744 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-201ENST00000266679 EEF1AKMT1Q8WVE0 214 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 PBXIP1Q96AQ6 731 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 EME1Q96AY2 570 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 KLF16Q9BXK1 252 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-201ENST00000266679 CWH43Q9H720 699 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 MAP10Q9P2G4 905 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 LHX3Q9UBR4 397 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 AFF4Q9UHB7 1163 aaKnown RBP12.78□□□□□ -0.36
CPSF6-201ENST00000266679 EIF2B4Q9UI10 523 aaKnown RBP12.78□□□□□ -0.36
CPSF6-201ENST00000266679 APPL1Q9UKG1 709 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 PCTPQ9UKL6 214 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 VPS9D1Q9Y2B5 631 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 TBC1D30Q9Y2I9 924 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 FCF1Q9Y324 198 aaKnown RBP12.78□□□□□ -0.36
CPSF6-201ENST00000266679 NDUFAF1Q9Y375 327 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 YIPF1Q9Y548 306 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 MICAL3Q7RTP6 2002 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 IQCF5A8MTL0 148 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 E5RI56 91 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 H0Y626 953 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 SNX2O60749 519 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 STAMBPO95630 424 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 TSPAN12O95859 305 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 MBL2P11226 248 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-201ENST00000266679 CTPS1P17812 591 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 PSMA3P25788 255 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 HK3P52790 923 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 MTX3Q5HYI7 312 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 PSRC1Q6PGN9 363 aaPredicted RBP12.78□□□□□ -0.36
CPSF6-201ENST00000266679 NCEH1Q6PIU2 408 aa12.78□□□□□ -0.36
CPSF6-201ENST00000266679 DHFR2Q86XF0 187 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms