RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TFDP2Q14188 446 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 PRKD1Q15139 912 aaPredicted RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 SLC14A2Q15849 920 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 ODF2Q5BJF6 829 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 TMEM71Q6P5X7 295 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 BZW1Q7L1Q6 419 aaKnown RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 ZNF761Q86XN6 746 aaPredicted RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 AGBL5Q8NDL9 886 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 SLC37A2Q8TED4 501 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 CCDC74BQ96LY2 380 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 TEKT5Q96M29 485 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 TAAR9Q96RI9 348 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 SLC38A3Q99624 504 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 DPYSL5Q9BPU6 564 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 ZSCAN5AQ9BUG6 496 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 OR2AG1Q9H205 316 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 CARD9Q9H257 536 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 GLOD4Q9HC38 313 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 TRIM39Q9HCM9 518 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 SARS2Q9NP81 518 aaKnown RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 TMEM9Q9P0T7 183 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 ATXN10Q9UBB4 475 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 KCNK6Q9Y257 313 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 PCDHGA3Q9Y5H0 932 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 COL27A1Q8IZC6 1860 aaPredicted RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 ZNF462Q96JM2 2506 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 HELZ2Q9BYK8 2649 aaKnown RBP9.61□□□□□ -0.87
VPS41-201ENST00000265745 CFAP46Q8IYW2 2715 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 GPR89AB7ZAQ6 455 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 AURKAO14965 403 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 CHUKO15111 745 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 CST8O60676 142 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 PMPCBO75439 489 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 SLC25A14O95258 325 aaPredicted RBP9.61□□□□□ -0.87
VPS41-201ENST00000265745 NDST3O95803 873 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 EPOP01588 193 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 GPR89BP0CG08 455 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 ACP5P13686 325 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 F3P13726 295 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 PECAM1P16284 738 aaPredicted RBP9.61□□□□□ -0.87
VPS41-201ENST00000265745 BPIP17213 487 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 CSTF2P33240 577 aaKnown RBP eCLIP9.61□□□□□ -0.87
VPS41-201ENST00000265745 CD68P34810 354 aaPredicted RBP9.61□□□□□ -0.87
VPS41-201ENST00000265745 MAGEA1P43355 309 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 ARSDP51689 593 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 CLCNKAP51800 687 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 HHEXQ03014 270 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 ADCY2Q08462 1091 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 WASHC5Q12768 1159 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 LY6DQ14210 128 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 LLGL1Q15334 1064 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 PCSK7Q16549 785 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 ZNF648Q5T619 568 aaPredicted RBP9.61□□□□□ -0.87
VPS41-201ENST00000265745 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
VPS41-201ENST00000265745 ALS2CLQ60I27 953 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 PDPK2PQ6A1A2 396 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 CCDC70Q6NSX1 233 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 WDR74Q6RFH5 385 aaPredicted RBP9.61□□□□□ -0.87
VPS41-201ENST00000265745 ADGRG6Q86SQ4 1221 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 ZNF605Q86T29 641 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 SLC9B2Q86UD5 537 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 RCOR2Q8IZ40 523 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 TRAM1L1Q8N609 369 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 TC2NQ8N9U0 490 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 OR10G6Q8NH81 332 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 TFB1MQ8WVM0 346 aaKnown RBP9.61□□□□□ -0.87
VPS41-201ENST00000265745 GLYATL1Q969I3 302 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 SH3KBP1Q96B97 665 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 SGF29Q96ES7 293 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 HERPUD2Q9BSE4 406 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 SPATA16Q9BXB7 569 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 GPR63Q9BZJ6 419 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 SEMA4CQ9C0C4 833 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 SLC6A16Q9GZN6 736 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 ARFGAP3Q9NP61 516 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 PRDM8Q9NQV8 689 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 RAD18Q9NS91 495 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 NFKBIL1Q9UBC1 381 aaPredicted RBP9.61□□□□□ -0.87
VPS41-201ENST00000265745 FAM153AQ9UHL3 310 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 ZNF711Q9Y462 761 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 PCDHB11Q9Y5F2 797 aa9.61□□□□□ -0.87
VPS41-201ENST00000265745 A0A0A6YYK5 440 aaPredicted RBP9.6□□□□□ -0.87
VPS41-201ENST00000265745 KIR2DS5A0A0G2JLQ3 304 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 A0A0G2JNG1 304 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 LOC285095A0A1B0GVY8 99 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 SOWAHDA6NJG2 315 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 OR5K4A6NMS3 321 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 B4E171 279 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 STMND1H3BQB6 276 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 KIR2DS3K7RE56 304 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 MTSS1O43312 755 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 PSTPIP1O43586 416 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 SNX2O60749 519 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 ZRANB2O95218 330 aaKnown RBP eCLIP9.6□□□□□ -0.87
VPS41-201ENST00000265745 LCA5LO95447 670 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 WT1P19544 449 aaPredicted RBP9.6□□□□□ -0.87
VPS41-201ENST00000265745 TSPAN7P41732 249 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 WNT3AP56704 352 aa9.6□□□□□ -0.87
VPS41-201ENST00000265745 NFATC2Q13469 925 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms