RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 TXNDC16Q9P2K2 825 aa12.43□□□□□ -0.42
CLNS1A-201ENST00000263309 FKBPLQ9UIM3 349 aa12.43□□□□□ -0.42
CLNS1A-201ENST00000263309 SUFUQ9UMX1 484 aa12.43□□□□□ -0.42
CLNS1A-201ENST00000263309 SOX13Q9UN79 622 aa12.43□□□□□ -0.42
CLNS1A-201ENST00000263309 SLC17A4Q9Y2C5 497 aa12.43□□□□□ -0.42
CLNS1A-201ENST00000263309 TMEM98Q9Y2Y6 226 aa12.43□□□□□ -0.42
CLNS1A-201ENST00000263309 SNX24Q9Y343 169 aa12.43□□□□□ -0.42
CLNS1A-201ENST00000263309 RPS6KL1Q9Y6S9 549 aa12.43□□□□□ -0.42
CLNS1A-201ENST00000263309 FAM237BA0A1B0GVD1 139 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 TMEM202A6NGA9 273 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 LMO7DNF2Z398 122 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 H3BMM5 538 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 CDX4O14627 284 aaPredicted RBP12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 EIF3HO15372 352 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 TNFSF14O43557 240 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 TRIM16O95361 564 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 FTH1P02794 183 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 ATP1B2P14415 290 aaPredicted RBP12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 PGAM1P18669 254 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 TGM1P22735 817 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 MCM3P25205 808 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 ITGA8P53708 1063 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 E2F1Q01094 437 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 IL9RQ01113 521 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 ITIH4Q14624 930 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 NR0B2Q15466 257 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 TRIP6Q15654 476 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 ALG11Q2TAA5 492 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 BBS9Q3SYG4 887 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 SPANXN3Q5MJ09 141 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 RNASEH2BQ5TBB1 312 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 DGLUCYQ7Z3D6 616 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 AMZ2Q86W34 360 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 LRRC6Q86X45 466 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 RBFAQ8N0V3 343 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 SLC22A18ASQ8N1D0 253 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 NXPE1Q8N323 547 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 DDHD1Q8NEL9 900 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 OR13C4Q8NGS5 318 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 WDR48Q8TAF3 677 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 PYROXD1Q8WU10 500 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 NAT6Q93015 286 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 SGSM3Q96HU1 749 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 COX14Q96I36 57 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 DNAJC1Q96KC8 554 aaKnown RBP12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 SERPINB12Q96P63 405 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 LGR4Q9BXB1 951 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 DPH5Q9H2P9 285 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 FSCN3Q9NQT6 498 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 SMOXQ9NWM0 555 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 NSMCE4AQ9NXX6 385 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 DLL3Q9NYJ7 618 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 GULP1Q9UBP9 304 aa12.42□□□□□ -0.42
CLNS1A-201ENST00000263309 TPRP12270 2363 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 K7ESM1 405 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 CD3EAPO15446 510 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 FFAR2O15552 330 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 RAD51CO43502 376 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 GDF9O60383 454 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 UGT1A9O60656 530 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 SDC3O75056 442 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 USP1O94782 785 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 SEC31AO94979 1220 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 VAPBO95292 243 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 CEACAM5P06731 702 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 UGT1A6P19224 532 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 UGT1A1P22309 533 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 UGT1A4P22310 534 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 UGT1A3P35503 534 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 UGT1A5P35504 534 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 ACTR1BP42025 376 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 ZNF140P52738 457 aaPredicted RBP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 ACTR1AP61163 376 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 GUCY2DQ02846 1103 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 BNIP3Q12983 259 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 EIF2B5Q13144 721 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 ILKQ13418 452 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 OLIG2Q13516 323 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 HLTFQ14527 1009 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 LONRF1Q17RB8 773 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 FAM182AQ5T1J6 154 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 GPRC6AQ5T6X5 926 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 PTRHD1Q6GMV3 140 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 HIBCHQ6NVY1 386 aaPredicted RBP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 TTC23LQ6PF05 361 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 TMEM220Q6QAJ8 160 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 TRIM48Q8IWZ4 208 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 CNPY4Q8N129 248 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 ZNF548Q8NEK5 533 aaPredicted RBP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 OR4C6Q8NH72 309 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 CNDP2Q96KP4 475 aaKnown RBP12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 SMIM14Q96QK8 99 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 PANX3Q96QZ0 392 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 AGAP2Q99490 1192 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 CCM2Q9BSQ5 444 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 FAM167BQ9BTA0 163 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 OSGEPL1Q9H4B0 414 aa12.41□□□□□ -0.42
CLNS1A-201ENST00000263309 UGT1A7Q9HAW7 530 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms