RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 STAG3L4Q8TBR4 150 aa12.85□□□□□ -0.35
SEC23B-201ENST00000262544 GFM2Q969S9 779 aaKnown RBP12.85□□□□□ -0.35
SEC23B-201ENST00000262544 C12orf43Q96C57 262 aaKnown RBP12.85□□□□□ -0.35
SEC23B-201ENST00000262544 FBXL8Q96CD0 374 aa12.85□□□□□ -0.35
SEC23B-201ENST00000262544 C17orf80Q9BSJ5 609 aa12.85□□□□□ -0.35
SEC23B-201ENST00000262544 GID8Q9NWU2 228 aa12.85□□□□□ -0.35
SEC23B-201ENST00000262544 TCRBV3S1A0A5B6 114 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 ZBBXA8MT70 800 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 C1RP00736 705 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 GSNP06396 782 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 PRKACGP22612 351 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 MC4RP32245 332 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 CYP2C18P33260 490 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 TRAF2Q12933 501 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 BNIP3Q12983 259 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 DCTN2Q13561 401 aaKnown RBP12.84□□□□□ -0.35
SEC23B-201ENST00000262544 PTGR1Q14914 329 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 SLC44A4Q53GD3 710 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 FGD3Q5JSP0 725 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 MSANTD2Q6P1R3 559 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 FAM126BQ8IXS8 530 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 RIN3Q8TB24 985 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
SEC23B-201ENST00000262544 GAB3Q8WWW8 586 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 RBM38Q9H0Z9 239 aaKnown RBP12.84□□□□□ -0.35
SEC23B-201ENST00000262544 PLK2Q9NYY3 685 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 TRMT6Q9UJA5 497 aaKnown RBP12.84□□□□□ -0.35
SEC23B-201ENST00000262544 VPS28Q9UK41 221 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 ZFP37Q9Y6Q3 630 aaPredicted RBP12.84□□□□□ -0.35
SEC23B-201ENST00000262544 A0A0U1RQF3 1178 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 UPK3BL1B0FP48 263 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 UPK3BL2E5RIL1 263 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 FXYD1O00168 92 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 CACNG3O60359 315 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 IGLV3-25P01717 112 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 RHOQP17081 205 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 GSSP48637 474 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 CSRP3P50461 194 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 EMP3P54852 163 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 LSM3P62310 102 aaKnown RBP12.84□□□□□ -0.35
SEC23B-201ENST00000262544 HMGCS1Q01581 520 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 LCP2Q13094 533 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 PMS2P3Q13401 168 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 SELPLGQ14242 412 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 ATP6AP1LQ52LC2 224 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 NHSL2Q5HYW2 709 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 MANEALQ5VSG8 457 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 CARM1Q86X55 608 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 OR2T11Q8NH01 316 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 CHID1Q9BWS9 393 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 CXorf21Q9HAI6 301 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 ATP13A1Q9HD20 1204 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 TLR6Q9Y2C9 796 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 POLR3HQ9Y535 204 aaPredicted RBP12.84□□□□□ -0.35
SEC23B-201ENST00000262544 DGKBQ9Y6T7 804 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 MIA3Q5JRA6 1907 aa12.84□□□□□ -0.35
SEC23B-201ENST00000262544 KRT87PA6NCN2 255 aa12.83□□□□□ -0.35
SEC23B-201ENST00000262544 SNAP91O60641 907 aa12.83□□□□□ -0.35
SEC23B-201ENST00000262544 SLC22A3O75751 556 aa12.83□□□□□ -0.35
SEC23B-201ENST00000262544 RPP40O75818 363 aaKnown RBP12.83□□□□□ -0.35
SEC23B-201ENST00000262544 CAPN1P07384 714 aa12.83□□□□□ -0.35
SEC23B-201ENST00000262544 APOFQ13790 326 aa12.83□□□□□ -0.35
SEC23B-201ENST00000262544 ARMC12Q5T9G4 340 aa12.83□□□□□ -0.35
SEC23B-201ENST00000262544 PRSS55Q6UWB4 352 aaPredicted RBP12.83□□□□□ -0.35
SEC23B-201ENST00000262544 DHRSXQ8N5I4 330 aa12.83□□□□□ -0.35
SEC23B-201ENST00000262544 PTCD2Q8WV60 388 aaKnown RBP12.83□□□□□ -0.35
SEC23B-201ENST00000262544 RPF2Q9H7B2 306 aaKnown RBP12.83□□□□□ -0.35
SEC23B-201ENST00000262544 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.83□□□□□ -0.35
SEC23B-201ENST00000262544 UTS2RQ9UKP6 389 aa12.83□□□□□ -0.35
SEC23B-201ENST00000262544 GABRQQ9UN88 632 aa12.83□□□□□ -0.35
SEC23B-201ENST00000262544 PCDHB9Q9Y5E1 797 aa12.83□□□□□ -0.35
SEC23B-201ENST00000262544 F5H5T6 163 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 GSTA4O15217 222 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 SLC22A2O15244 555 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 STX7O15400 261 aaKnown RBP12.83□□□□□ -0.36
SEC23B-201ENST00000262544 ALPIP09923 528 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 SLC2A4P14672 509 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 IL7RP16871 459 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 STC1P52823 247 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 TAF12Q16514 161 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 SMYD5Q6GMV2 418 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 ANKRD46Q86W74 232 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 KIAA2013Q8IYS2 634 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 SLC22A15Q8IZD6 547 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 AURKBQ96GD4 344 aaPredicted RBP12.83□□□□□ -0.36
SEC23B-201ENST00000262544 GPR62Q9BZJ7 368 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 ANGPTL3Q9Y5C1 460 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 RSL1D1O76021 490 aaKnown RBP12.83□□□□□ -0.36
SEC23B-201ENST00000262544 ATE1O95260 518 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 G6PDP11413 515 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 ZNF182P17025 639 aaPredicted RBP12.83□□□□□ -0.36
SEC23B-201ENST00000262544 EFNA1P20827 205 aaPredicted RBP12.83□□□□□ -0.36
SEC23B-201ENST00000262544 CCR3P51677 355 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 CLCN2P51788 898 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 POLR2JP52435 117 aaKnown RBP12.83□□□□□ -0.36
SEC23B-201ENST00000262544 TIAL1Q01085 375 aaKnown RBP eCLIP12.83□□□□□ -0.36
SEC23B-201ENST00000262544 CTBSQ01459 385 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 ATXN7L2Q5T6C5 722 aaPredicted RBP12.83□□□□□ -0.36
SEC23B-201ENST00000262544 GLYATQ6IB77 296 aa12.83□□□□□ -0.36
SEC23B-201ENST00000262544 NANOGP8Q6NSW7 305 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms