RNA–Protein interactions for RNA: ENST00000261647.9

TTC19-201, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC19, Length 3,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-201ENST00000261647 TRIM54Q9BYV2 358 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 AMBRA1Q9C0C7 1298 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 J3KR12 359 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 PAGE1O75459 146 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 CRCPO75575 148 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 CAPN15O75808 1086 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 MATN4O95460 622 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 CYBBP04839 570 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 C7P10643 843 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 PABPC1P11940 636 aaKnown RBP18.66■□□□□ 0.58
TTC19-201ENST00000261647 SERPINH1P50454 418 aaKnown RBP18.66■□□□□ 0.58
TTC19-201ENST00000261647 DAG1Q14118 895 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 FSCN1Q16658 493 aaKnown RBP18.66■□□□□ 0.58
TTC19-201ENST00000261647 INAVAQ3KP66 663 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 KDELC1Q6UW63 502 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 THAP5Q7Z6K1 395 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 CCDC138Q96M89 665 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 ZNF347Q96SE7 839 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 PAK1IP1Q9NWT1 392 aaPredicted RBP18.66■□□□□ 0.58
TTC19-201ENST00000261647 HACD3Q9P035 362 aa18.66■□□□□ 0.58
TTC19-201ENST00000261647 TTC3P53804 2025 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 FGF4P08620 206 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 TPD52P55327 224 aaPredicted RBP18.65■□□□□ 0.58
TTC19-201ENST00000261647 CLCQ05315 142 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 TFAP2DQ7Z6R9 452 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 ITPKCQ96DU7 683 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 SENP8Q96LD8 212 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 PALMDQ9NP74 551 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 SEPT3Q9UH03 358 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 INVSQ9Y283 1065 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 CLDN25C9JDP6 229 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 ALDH3A2P51648 485 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 NKX2-5P52952 324 aaPredicted RBP18.65■□□□□ 0.58
TTC19-201ENST00000261647 NKG7Q16617 165 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 APOBEC3FQ8IUX4 373 aaKnown RBP18.65■□□□□ 0.58
TTC19-201ENST00000261647 Q8N9G6 341 aaPredicted RBP18.65■□□□□ 0.58
TTC19-201ENST00000261647 STARD8Q92502 1023 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 FCRL2Q96LA5 508 aaPredicted RBP18.65■□□□□ 0.58
TTC19-201ENST00000261647 NSMCE2Q96MF7 247 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 MRM3Q9HC36 420 aaKnown RBP18.65■□□□□ 0.58
TTC19-201ENST00000261647 PIM2Q9P1W9 311 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 KLQ9UEF7 1012 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 ZNF225Q9UK10 706 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 CSADQ9Y600 493 aa18.65■□□□□ 0.58
TTC19-201ENST00000261647 ZBBXA8MT70 800 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 SUPT3HB4E1H0 165 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 H0YAE9 185 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 PTGESO14684 152 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 CCR1P32246 355 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 PNPLA4P41247 253 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 MTHFRP42898 656 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 OCA2Q04671 838 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 SLC10A7Q0GE19 358 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 RCAN2Q14206 197 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 PAN2Q504Q3 1202 aaKnown RBP18.64■□□□□ 0.57
TTC19-201ENST00000261647 TMEM236Q5W0B7 351 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 ENPP6Q6UWR7 440 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 SLCO6A1Q86UG4 719 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 CHDHQ8NE62 594 aaPredicted RBP18.64■□□□□ 0.57
TTC19-201ENST00000261647 PPTC7Q8NI37 304 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 FBXO30Q8TB52 745 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 PTCD2Q8WV60 388 aaKnown RBP18.64■□□□□ 0.57
TTC19-201ENST00000261647 OSCP1Q8WVF1 389 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 CDK15Q96Q40 435 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 MROQ9BYG7 248 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 YTHDF1Q9BYJ9 559 aaKnown RBP18.64■□□□□ 0.57
TTC19-201ENST00000261647 CPA4Q9UI42 421 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 BAG5Q9UL15 447 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 FAM50BQ9Y247 325 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 WDR90Q96KV7 1748 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 GABRDO14764 452 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 XPNPEP2O43895 674 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 F9P00740 461 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 DGKQP52824 942 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 GP2P55259 537 aaKnown RBP18.64■□□□□ 0.57
TTC19-201ENST00000261647 CD47Q08722 323 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 RAB41Q5JT25 222 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 UBXN11Q5T124 520 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 CCDC80Q76M96 950 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 TOP6BLQ8N6T0 577 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 NDNFQ8TB73 568 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 DNAJB3Q8WWF6 145 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 NRBF2Q96F24 287 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 CNDP2Q96KP4 475 aaKnown RBP18.64■□□□□ 0.57
TTC19-201ENST00000261647 MTRRQ9UBK8 725 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 ASB1Q9Y576 335 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 ARL5AQ9Y689 179 aa18.64■□□□□ 0.57
TTC19-201ENST00000261647 POLR2AP24928 1970 aaKnown RBP18.64■□□□□ 0.57
TTC19-201ENST00000261647 SLC22A3O75751 556 aa18.63■□□□□ 0.57
TTC19-201ENST00000261647 GSTM2P28161 218 aa18.63■□□□□ 0.57
TTC19-201ENST00000261647 TGFBR1P36897 503 aa18.63■□□□□ 0.57
TTC19-201ENST00000261647 POLR2JP52435 117 aaKnown RBP18.63■□□□□ 0.57
TTC19-201ENST00000261647 TPTEP56180 551 aa18.63■□□□□ 0.57
TTC19-201ENST00000261647 SF3B4Q15427 424 aaKnown RBP eCLIP18.63■□□□□ 0.575e-6■□□□□ 10.7
TTC19-201ENST00000261647 CTF1Q16619 201 aa18.63■□□□□ 0.57
TTC19-201ENST00000261647 PAGE2BQ5JRK9 111 aa18.63■□□□□ 0.57
TTC19-201ENST00000261647 C6orf141Q5SZD1 244 aa18.63■□□□□ 0.57
TTC19-201ENST00000261647 C8orf59Q8N0T1 100 aaPredicted RBP18.63■□□□□ 0.57
TTC19-201ENST00000261647 PNPT1Q8TCS8 783 aaKnown RBP18.63■□□□□ 0.57
TTC19-201ENST00000261647 CALML6Q8TD86 181 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms