RNA–Protein interactions for RNA: ENST00000252595.11

SLC27A1-201, Transcript of solute carrier family 27 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC27A1, Length 3,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-201ENST00000252595 TSSK3Q96PN8 268 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 C1orf21Q9H246 121 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 PDP2Q9P2J9 529 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 YIPF1Q9Y548 306 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 MSLNQ13421 630 aaPredicted RBP16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 TRIM25Q14258 630 aaKnown RBP16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 SLC2A7Q6PXP3 512 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 CBR4Q8N4T8 237 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 FAM47BQ8NA70 645 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 SORCS1Q8WY21 1168 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 BBS2Q9BXC9 721 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 ING2Q9H160 280 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 GSTO2Q9H4Y5 243 aa16.47■□□□□ 0.23
SLC27A1-201ENST00000252595 OTOFQ9HC10 1997 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 A0A1B0GVM2 712 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 SAMD4BQ5PRF9 694 aaKnown RBP16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 ADGRF1Q5T601 910 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 AAGABQ6PD74 315 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 LRRC49Q8IUZ0 686 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 PNPT1Q8TCS8 783 aaKnown RBP16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 AARSD1Q9BTE6 412 aaKnown RBP16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 ARL15Q9NXU5 204 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 ASB1Q9Y576 335 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 OR2AG2A6NM03 316 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 NPHS1O60500 1241 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 PSMA4P25789 261 aaKnown RBP16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 ZNF648Q5T619 568 aaPredicted RBP16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 TTC33Q6PID6 262 aaPredicted RBP16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 TSPAN33Q86UF1 283 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 PDSS2Q86YH6 399 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 LILRA2Q8N149 483 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 LMNTD1Q8N9Z9 388 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 SLC22A17Q8WUG5 538 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 MPP4Q96JB8 637 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.46■□□□□ 0.239e-6■■■■■ 32.4
SLC27A1-201ENST00000252595 IPPKQ9H8X2 491 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 GID8Q9NWU2 228 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 MARCH5Q9NX47 278 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 VPS4AQ9UN37 437 aa16.46■□□□□ 0.23
SLC27A1-201ENST00000252595 ALDOCP09972 364 aaKnown RBP16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 ITGALP20701 1170 aa16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 DSC1Q08554 894 aa16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 IKBKEQ14164 716 aa16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 RFLNAQ6ZTI6 216 aa16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 TTC30BQ8N4P2 665 aa16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 OR56A4Q8NGH8 313 aa16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 WFDC5Q8TCV5 224 aa16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 PTCD2Q8WV60 388 aaKnown RBP16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 MED8Q96G25 268 aa16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 ZFYVE1Q9HBF4 777 aa16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 IKZF3Q9UKT9 509 aa16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 PRPF19Q9UMS4 504 aaKnown RBP16.46■□□□□ 0.22
SLC27A1-201ENST00000252595 PLXNB2O15031 1838 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 SYCE1LA8MT33 242 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 MYO1GB0I1T2 1018 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 NEDD8-MDP1E9PL57 170 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 NR4A1P22736 598 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 HALP42357 657 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 RGS4P49798 205 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 GTF2H3Q13889 308 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 INPP5AQ14642 412 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 ZNF423Q2M1K9 1284 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 TMEM214Q6NUQ4 689 aaKnown RBP16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 FBXL19Q6PCT2 694 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 ZBTB18Q99592 522 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 MAGEH1Q9H213 219 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 POLG2Q9UHN1 485 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 VPS51Q9UID3 782 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 TRIM24O15164 1050 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 FAM58BPP0C7Q3 252 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 CDH4P55283 916 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 NEDD8Q15843 81 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 GCNT7Q6ZNI0 430 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 STK32CQ86UX6 486 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 TMEM151AQ8N4L1 468 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 FEM1CQ96JP0 617 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 C1orf74Q96LT6 269 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 ABCB8Q9NUT2 735 aa16.45■□□□□ 0.22
SLC27A1-201ENST00000252595 IL1BP01584 269 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 IGLV3-25P01717 112 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 ABCB1P08183 1280 aaPredicted RBP16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 CAPN3P20807 821 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 LCP2Q13094 533 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 MANEALQ5VSG8 457 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 RETSATQ6NUM9 610 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 AURKBQ96GD4 344 aaPredicted RBP16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 CCDC28BQ9BUN5 200 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 WARS2Q9UGM6 360 aaKnown RBP16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 PRMT5O14744 637 aaPredicted RBP16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 SCAMP1O15126 338 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 NTRK1P04629 796 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 HOXD9P28356 352 aaPredicted RBP16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 TTPAP49638 278 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 CDKL1Q00532 357 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 MAP7Q14244 749 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 ADGRE1Q14246 886 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 PTGR1Q14914 329 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 SZRD1Q7Z422 152 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 BNIPLQ7Z465 357 aa16.44■□□□□ 0.22
SLC27A1-201ENST00000252595 RETREG3Q86VR2 466 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms