RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CLEC4FQ8N1N0 589 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 PDZD8Q8NEN9 1154 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 ISG20Q96AZ6 181 aaKnown RBP15.4■□□□□ 0.06
DDX55-201ENST00000238146 LRRC3Q9BY71 257 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 TFB2MQ9H5Q4 396 aaKnown RBP15.4■□□□□ 0.06
DDX55-201ENST00000238146 HPS4Q9NQG7 708 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 KCNH4Q9UQ05 1017 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 CPQQ9Y646 472 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 KRBA1A5PL33 1030 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 ADM5C9JUS6 153 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 BCAS1O75363 584 aaPredicted RBP15.4■□□□□ 0.06
DDX55-201ENST00000238146 DEAF1O75398 565 aaPredicted RBP15.4■□□□□ 0.06
DDX55-201ENST00000238146 CRCPO75575 148 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 HTR1AP08908 422 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 PCNAP12004 261 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 NR4A1P22736 598 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 JAK1P23458 1154 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 CLCNKBP51801 687 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 AFF1P51825 1210 aaKnown RBP15.4■□□□□ 0.06
DDX55-201ENST00000238146 SEMA3AQ14563 771 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 PTPRCAPQ14761 206 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 OXA1LQ15070 435 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 SKIV2LQ15477 1246 aaKnown RBP15.4■□□□□ 0.06
DDX55-201ENST00000238146 DUSP28Q4G0W2 176 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 SIRPB2Q5JXA9 342 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 SCIMPQ6UWF3 145 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 TMCO5AQ8N6Q1 288 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 TAMM41Q96BW9 452 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 SH3YL1Q96HL8 342 aaPredicted RBP15.4■□□□□ 0.06
DDX55-201ENST00000238146 MAGED4Q96JG8 741 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 FUNDC2Q9BWH2 189 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 BRINP2Q9C0B6 783 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 LTB4R2Q9NPC1 389 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 SLC27A5Q9Y2P5 690 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 PCDHGA8Q9Y5G5 932 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 DGKBQ9Y6T7 804 aa15.4■□□□□ 0.06
DDX55-201ENST00000238146 COL4A4P53420 1690 aaPredicted RBP15.39■□□□□ 0.05
DDX55-201ENST00000238146 LTBP3Q9NS15 1303 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 E9PAM4 449 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 J3KR12 359 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 MOCS2O96007 188 aaPredicted RBP15.39■□□□□ 0.05
DDX55-201ENST00000238146 PGFP49763 221 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 RENBPP51606 427 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 C1QTNF12Q5T7M4 302 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 TWF2Q6IBS0 349 aaKnown RBP15.39■□□□□ 0.05
DDX55-201ENST00000238146 LRRC49Q8IUZ0 686 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 C8orf59Q8N0T1 100 aaPredicted RBP15.39■□□□□ 0.05
DDX55-201ENST00000238146 DTWD1Q8N5C7 304 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 HDAC2Q92769 488 aaKnown RBP15.39■□□□□ 0.05
DDX55-201ENST00000238146 ZNF599Q96NL3 588 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 TOR3AQ9H497 397 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 WARS2Q9UGM6 360 aaKnown RBP15.39■□□□□ 0.05
DDX55-201ENST00000238146 MIA3Q5JRA6 1907 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 TMEM247A6NEH6 219 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 SUPT3HB4E1H0 165 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 KPNA4O00629 521 aaPredicted RBP15.39■□□□□ 0.05
DDX55-201ENST00000238146 CNTN5O94779 1100 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 GOT2P00505 430 aaKnown RBP15.39■□□□□ 0.05
DDX55-201ENST00000238146 RPS3AP61247 264 aaKnown RBP15.39■□□□□ 0.05
DDX55-201ENST00000238146 IMPG1Q17R60 797 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 XKR7Q5GH72 579 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 SLC2A7Q6PXP3 512 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 CRTC3Q6UUV7 619 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 SLC16A12Q6ZSM3 486 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 PIWIL3Q7Z3Z3 882 aaKnown RBP15.39■□□□□ 0.05
DDX55-201ENST00000238146 HID1Q8IV36 788 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 FBXO39Q8N4B4 442 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 OR2T11Q8NH01 316 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 CASP10Q92851 521 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 ALPK1Q96QP1 1244 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 RTP3Q9BQQ7 232 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 MROQ9BYG7 248 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 ZNF225Q9UK10 706 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 IKZF3Q9UKT9 509 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 ZNF232Q9UNY5 417 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 PCDHB3Q9Y5E6 796 aa15.39■□□□□ 0.05
DDX55-201ENST00000238146 DICER1Q9UPY3 1922 aaKnown RBP15.38■□□□□ 0.05
DDX55-201ENST00000238146 CLDN25C9JDP6 229 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 CD3EAPO15446 510 aaKnown RBP15.38■□□□□ 0.05
DDX55-201ENST00000238146 TULP3O75386 442 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 GLP2RO95838 553 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 PIGFQ07326 219 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 ANKS6Q68DC2 871 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 PROKR1Q8TCW9 393 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 UXTQ9UBK9 157 aaPredicted RBP15.38■□□□□ 0.05
DDX55-201ENST00000238146 DAPK2Q9UIK4 370 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 MAGEL2Q9UJ55 1249 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 NUDT5Q9UKK9 219 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 HS3ST4Q9Y661 456 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 HTR3EA5X5Y0 456 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 KERAO60938 352 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 ATXN1LP0C7T5 689 aaKnown RBP15.38■□□□□ 0.05
DDX55-201ENST00000238146 RAP2AP10114 183 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 HTR1BP28222 390 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 HOXD12P35452 270 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 EIF2B2P49770 351 aaKnown RBP15.38■□□□□ 0.05
DDX55-201ENST00000238146 SELPLGQ14242 412 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 MEP1AQ16819 746 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 DPY19L1Q2PZI1 675 aa15.38■□□□□ 0.05
DDX55-201ENST00000238146 C6orf141Q5SZD1 244 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms