RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ANLNQ9NQW6 1124 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 TMEM30AQ9NV96 361 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 CCDC167Q9P0B6 97 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 CLEC1BQ9P126 229 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 GNPTGQ9UJJ9 305 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 FBXO5Q9UKT4 447 aa20.44■□□□□ 0.86
SNX3-201ENST00000230085 UNC80Q8N2C7 3258 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 H0YAE9 185 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 H3BMQ9 156 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 ACOX3O15254 700 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 JCHAINP01591 159 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 TPH1P17752 444 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 PSMA4P25789 261 aaKnown RBP20.43■□□□□ 0.86
SNX3-201ENST00000230085 AVPR1AP37288 418 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 STX1BP61266 288 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 TUBA3CQ13748 450 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 UGT3A2Q3SY77 523 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 FAM35AQ86V20 835 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 DENND6AQ8IWF6 608 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 ADGRG5Q8IZF4 528 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 SCML4Q8N228 414 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 TBC1D15Q8TC07 691 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 COG8Q96MW5 612 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 ARNT2Q9HBZ2 717 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 BLOC1S6Q9UL45 172 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 MAFFQ9ULX9 164 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 WDR37Q9Y2I8 494 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 INSL5Q9Y5Q6 135 aa20.43■□□□□ 0.86
SNX3-201ENST00000230085 ZNF839A8K0R7 811 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 NME4O00746 187 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 PAPSS2O95340 614 aaPredicted RBP20.42■□□□□ 0.86
SNX3-201ENST00000230085 F7P08709 466 aaPredicted RBP20.42■□□□□ 0.86
SNX3-201ENST00000230085 HAPLN1P10915 354 aaPredicted RBP20.42■□□□□ 0.86
SNX3-201ENST00000230085 VARSP26640 1264 aaKnown RBP20.42■□□□□ 0.86
SNX3-201ENST00000230085 HOXC13P31276 330 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 GRIA3P42263 894 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 GPR15P49685 360 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 TMBIM6P55061 237 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 NME3Q13232 169 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 C16orf72Q14CZ0 275 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 DDR2Q16832 855 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 MAP7D1Q3KQU3 841 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 SLC44A4Q53GD3 710 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 TBCELQ5QJ74 424 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 CCDC149Q6ZUS6 474 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 BEND5Q7L4P6 421 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 CHPT1Q8WUD6 406 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 PPWD1Q96BP3 646 aaKnown RBP20.42■□□□□ 0.86
SNX3-201ENST00000230085 ELMO2Q96JJ3 720 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 GLOD4Q9HC38 313 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 ACSS2Q9NR19 701 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 DPP7Q9UHL4 492 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 CROCCQ5TZA2 2017 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 NUP205Q92621 2012 aa20.42■□□□□ 0.86
SNX3-201ENST00000230085 FXYD1O00168 92 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 ATP6V1G1O75348 118 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 BEST1O76090 585 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 HNRNPLP14866 589 aaKnown RBP eCLIP20.41■□□□□ 0.86
SNX3-201ENST00000230085 CAPGP40121 348 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 TUFMP49411 452 aaKnown RBP20.41■□□□□ 0.86
SNX3-201ENST00000230085 HLCSP50747 726 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 SLC12A2P55011 1212 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 CDH15P55291 814 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 PLOD1Q02809 727 aaPredicted RBP20.41■□□□□ 0.86
SNX3-201ENST00000230085 CBX3Q13185 183 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 SDHAF4Q5VUM1 108 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 LINC00299Q6ZSB3 139 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 GPR152Q8TDT2 470 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 APOL2Q9BQE5 337 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 APOL5Q9BWW9 433 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 TRIM54Q9BYV2 358 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 CCDC68Q9H2F9 335 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 MAP10Q9P2G4 905 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 YIPF1Q9Y548 306 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 DOCK6Q96HP0 2047 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 GOLGA8TH3BQL2 631 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 MAGEB3O15480 346 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 ATE1O95260 518 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 HOXB8P17481 243 aaPredicted RBP20.41■□□□□ 0.86
SNX3-201ENST00000230085 ATF6P18850 670 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 GRIK1P39086 918 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 TWF1Q12792 350 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 CTBP1Q13363 440 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 ESRP1Q6NXG1 681 aaKnown RBP20.41■□□□□ 0.86
SNX3-201ENST00000230085 ANKRD54Q6NXT1 300 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 SYCE2Q6PIF2 218 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 TMC5Q6UXY8 1006 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 RANBP10Q6VN20 620 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 CYP2R1Q6VVX0 501 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 HFE2Q6ZVN8 426 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 RETREG3Q86VR2 466 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 SCN4BQ8IWT1 228 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 SLC15A3Q8IY34 581 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 CLYBLQ8N0X4 340 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 ZNF786Q8N393 782 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 MAFAQ8NHW3 353 aaPredicted RBP20.41■□□□□ 0.86
SNX3-201ENST00000230085 GIPC3Q8TF64 312 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 MAGEE1Q9HCI5 957 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 TNFRSF12AQ9NP84 129 aa20.41■□□□□ 0.86
SNX3-201ENST00000230085 GID8Q9NWU2 228 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms