RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TEX37Q96LM6 180 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 DOK1Q99704 481 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 MGME1Q9BQP7 344 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 PLGRKTQ9HBL7 147 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 RIC8BQ9NVN3 520 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 EBF1Q9UH73 591 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 IKZF3Q9UKT9 509 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 FAM50BQ9Y247 325 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 TIMM22Q9Y584 194 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 PCDHB5Q9Y5E4 795 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 TMEM189-UBE2V1I3L0A0 370 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 TBX18O95935 607 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 CD9P21926 228 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 GRK4P32298 578 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 APLP1P51693 650 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 ECT2LQ008S8 904 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 PAGE3Q5JUK9 113 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 C10orf120Q5SQS8 335 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 IL31Q6EBC2 164 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 USP51Q70EK9 711 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 IFNEQ86WN2 208 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 OR56A4Q8NGH8 313 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 C12orf43Q96C57 262 aaKnown RBP13.2□□□□□ -0.3
SRP54-201ENST00000216774 CXorf21Q9HAI6 301 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 ZFYVE28Q9HCC9 887 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 DNAH12Q6ZR08 3092 aa13.2□□□□□ -0.3
SRP54-201ENST00000216774 TTC3P53804 2025 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 H0YAE9 185 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 CDC7O00311 574 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 GIPC1O14908 333 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 VARSP26640 1264 aaKnown RBP13.19□□□□□ -0.3
SRP54-201ENST00000216774 DCKP27707 260 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 GALK1P51570 392 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 UFM1P61960 85 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 EMX2Q04743 252 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 TAF1AQ15573 450 aaPredicted RBP13.19□□□□□ -0.3
SRP54-201ENST00000216774 NANOGP8Q6NSW7 305 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 DPP10Q8N608 796 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 C2orf69Q8N8R5 385 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 TRPV1Q8NER1 839 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 PNPT1Q8TCS8 783 aaKnown RBP13.19□□□□□ -0.3
SRP54-201ENST00000216774 FBXO32Q969P5 355 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 FBXL20Q96IG2 436 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 GPR21Q99679 349 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 HGH1Q9BTY7 390 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 BDH2Q9BUT1 245 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 LRRC3Q9BY71 257 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 TRIM8Q9BZR9 551 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 NANOGQ9H9S0 305 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 TLR8Q9NR97 1041 aaKnown RBP13.19□□□□□ -0.3
SRP54-201ENST00000216774 SLC12A8A0AV02 714 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 NPEPPSL1A6NEC2 478 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 BTN3A1O00481 513 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 PFDN6O15212 129 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 C1RP00736 705 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 PRSS56P0CW18 603 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 DSC1Q08554 894 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 KLHL35Q6PF15 583 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 GLB1LQ6UWU2 654 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 GPRIN3Q6ZVF9 776 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 LYSMD3Q7Z3D4 306 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 LRRC43Q8N309 656 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 FNDC8Q8TC99 324 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 CNDP2Q96KP4 475 aaKnown RBP13.19□□□□□ -0.3
SRP54-201ENST00000216774 ZNF382Q96SR6 550 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 SLC30A3Q99726 388 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 TUBA1CQ9BQE3 449 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 RETREG1Q9H6L5 497 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 PKD2L2Q9NZM6 624 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 SEPT3Q9UH03 358 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 ZNF225Q9UK10 706 aa13.19□□□□□ -0.3
SRP54-201ENST00000216774 FAF1Q9UNN5 650 aaPredicted RBP13.19□□□□□ -0.3
SRP54-201ENST00000216774 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
SRP54-201ENST00000216774 VPS26AO75436 327 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 SEC24DO94855 1032 aaPredicted RBP13.18□□□□□ -0.3
SRP54-201ENST00000216774 NCK1P16333 377 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 PRDX3P30048 256 aaKnown RBP13.18□□□□□ -0.3
SRP54-201ENST00000216774 AGTR2P50052 363 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
SRP54-201ENST00000216774 ADARB1P78563 741 aaKnown RBP13.18□□□□□ -0.3
SRP54-201ENST00000216774 CTBSQ01459 385 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 PRKG2Q13237 762 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 RBBP7Q16576 425 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 FUT11Q495W5 492 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 TIGD2Q4W5G0 525 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 GLT6D1Q7Z4J2 308 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 ZFAND4Q86XD8 727 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 HID1Q8IV36 788 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 OR4K2Q8NGD2 314 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 BPIFB1Q8TDL5 484 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 ISG20Q96AZ6 181 aaKnown RBP13.18□□□□□ -0.3
SRP54-201ENST00000216774 BIRC7Q96CA5 298 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 PSKH2Q96QS6 385 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 MAGEH1Q9H213 219 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 RPF2Q9H7B2 306 aaKnown RBP13.18□□□□□ -0.3
SRP54-201ENST00000216774 SPC25Q9HBM1 224 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 MAGEL2Q9UJ55 1249 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 CDC14AQ9UNH5 594 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 PCDHB3Q9Y5E6 796 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 SPO11Q9Y5K1 396 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms