RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 MSR1P21757 451 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 GNPDA1P46926 289 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 PSEN2P49810 448 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 LAMTOR4Q0VGL1 99 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SLC5A9Q2M3M2 681 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 GXYLT1Q4G148 440 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 C17orf64Q86WR6 236 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 Q8N402 240 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CORO1BQ9BR76 489 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 LGR4Q9BXB1 951 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 PUS3Q9BZE2 481 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 KCNF1Q9H3M0 494 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 EVA1AQ9H8M9 152 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MARCH2Q9P0N8 246 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ERVW-1Q9UQF0 538 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 LYVE1Q9Y5Y7 322 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MCM3APO60318 1980 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 H3BM21 787 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ARL6IP5O75915 188 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 PRLP01236 227 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 PLEKP08567 350 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SLC35G4P0C7Q5 338 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 IL4RP24394 825 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CTSKP43235 329 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 LIPEQ05469 1076 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ADIGQ0VDE8 80 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ADAM15Q13444 863 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 DDX39BQ13838 428 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 OR10H5Q8NGA6 315 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 BRSK1Q8TDC3 778 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SLC38A4Q969I6 547 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 TMEM143Q96AN5 459 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 C1orf21Q9H246 121 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ALG2Q9H553 416 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 OR12D3Q9UGF7 316 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MCM8Q9UJA3 840 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ABCG2Q9UNQ0 655 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 NOTCH3Q9UM47 2321 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 RICTORQ6R327 1708 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 A0A1B0GVM2 712 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 TCAF2A6NFQ2 919 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MAP2K7O14733 419 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MSH4O15457 936 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 OR5F1O95221 314 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 IGKV5-2P06315 115 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ANXA8P13928 327 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 RGS8P57771 180 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 DPYSL3Q14195 570 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 NFE2L1Q14494 772 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 DCST1Q5T197 706 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF730Q6ZMV8 503 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 DEF8Q6ZN54 512 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MOB2Q70IA6 237 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SLC25A41Q8N5S1 370 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SUSD6Q92537 303 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ROBO2Q9HCK4 1378 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 POLRMTO00411 1230 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 NRP2O60462 931 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MRPS14O60783 128 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CLDN9O95484 217 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 GADD45AP24522 165 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 RPL21P46778 160 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 GRIA4P48058 902 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ALDH5A1P51649 535 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MANFP55145 182 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MAPK14Q16539 360 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CPSF7Q8N684 471 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 KLHL5Q96PQ7 755 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 TBC1D10AQ9BXI6 508 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 DDX18Q9NVP1 670 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SHPRHQ149N8 1683 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 RAB19A4D1S5 217 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 H7C2Y5 167 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CBX4O00257 560 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CBSLP0DN79 551 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CBSP35520 551 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 YBEYP58557 167 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF234Q14588 700 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 KCNT2Q6UVM3 1135 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 FBXO33Q7Z6M2 555 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ERI1Q8IV48 349 aaKnown RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 RXFP2Q8WXD0 754 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SPACA7Q96KW9 195 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 TRIM36Q9NQ86 728 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 MANSC4A6NHS7 340 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CHURC1-FNTBB4DL54 471 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 CLDN11O75508 207 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 FMR1Q06787 632 aaKnown RBP eCLIP6.04□□□□□ -1.442e-6■■■■□ 25.2
VPS13D-201ENST00000011700 LCP2Q13094 533 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ASTE1Q2TB18 679 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 FAM171BQ6P995 826 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 DRICH1Q6PGQ1 229 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-201ENST00000011700 BBS12Q6ZW61 710 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SLC47A2Q86VL8 602 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SIRT2Q8IXJ6 389 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 ARL10Q8N8L6 244 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 OR2T12Q8NG77 320 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 GIPC3Q8TF64 312 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 SLC5A5Q92911 643 aa6.04□□□□□ -1.44
VPS13D-201ENST00000011700 C16orf58Q96GQ5 468 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms