RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ints7Q7TQK1 966 aaKnown RBP22.52■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Defb22Q8BVC1 179 aa22.52■■□□□ 1.2
Scn1b-201ENSMUST00000098548 L2hgdhQ91YP0 464 aa22.52■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Cngb3Q9JJZ9 694 aa22.52■■□□□ 1.2
Scn1b-201ENSMUST00000098548 DmdP11531 3678 aa22.52■■□□□ 1.2
Scn1b-201ENSMUST00000098548 Tex13aA2AFS9 377 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Slc4a5E9Q3M5 1116 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 MttpO08601 894 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Cd151O35566 253 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Pknox1O70477 436 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 CtslP06797 334 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 ChgbP16014 677 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Cd19P25918 547 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Kif5aP33175 1027 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 LdlrP35951 862 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Abl2Q4JIM5 1182 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Rabl6Q5U3K5 725 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 GpamQ61586 827 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 TifaQ793I8 184 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Arhgap24Q8C4V1 747 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Dok4Q99KE3 325 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Lrrc4Q99PH1 652 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Bcl7aQ9CXE2 210 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Cab39lQ9DB16 337 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Cmtm7Q9ESD6 167 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Chrac1Q9JKP8 129 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Adam23Q9R1V7 829 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Top3bQ9Z321 862 aaKnown RBP22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Col27a1Q5QNQ9 1845 aa22.51■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Angpt1O08538 498 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Pdha1P35486 390 aaKnown RBP22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Ctps2P70303 586 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Nfe2l1Q61985 741 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Ablim3Q69ZX8 682 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Klhl29Q80T74 875 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Ubap1Q8BH48 502 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 4921511C20RikQ8BVT7 469 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Tmc7Q8C428 726 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Tmem154Q8C4Q9 181 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Zfp446Q8C9M8 523 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Cfap61Q8CEL2 1252 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Pkp3Q9QY23 797 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 MycsQ9Z304 431 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Znf536Q8K083 1302 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Fam46dB1ATX6 390 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Eif2b3B1AUN2 452 aaKnown RBP22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Vmn2r116E9Q6I0 856 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Gm20828J3KMI7 228 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Ezh1P70351 747 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Adra1dP97714 562 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Wbp1P97764 304 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 PrkcqQ02111 707 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Fam160a1Q505K2 1081 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Bcl2l1Q64373 233 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Tha1Q6XPS7 400 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Pi15Q8BS03 258 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Wdr60Q8C761 999 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Calcoco1Q8CGU1 691 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Adam32Q8K410 754 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Sirt3Q8R104 334 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Bag2Q91YN9 210 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Gps2Q921N8 327 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Mdm1Q9D067 708 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 SarnpQ9D1J3 210 aaKnown RBP22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Kctd4Q9D7X1 259 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Clca1Q9D7Z6 913 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Psmd12Q9D8W5 456 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Aldh7a1Q9DBF1 539 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Rsrc1Q9DBU6 334 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 PigqQ9QYT7 581 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 DnpepQ9Z2W0 473 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Gria3Q9Z2W9 888 aa22.5■■□□□ 1.19
Scn1b-201ENSMUST00000098548 CntrlA2AL36 2334 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Gm3604A0A087WPN2 559 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Gm7792A0A0J9YU01 481 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Zbtb34A2ATY4 518 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Gm3183D3YUJ6 481 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Gm3139J3QK78 481 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Gm3106J3QPH3 481 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 P01669 111 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 PnpP23492 289 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Pou2f3P31362 431 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Atp6v0d1P51863 351 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Ptpn5P54830 541 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Tial1P70318 392 aaKnown RBP22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Calb2Q08331 271 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 LchnQ3UHG7 455 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Nt5eQ61503 576 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Nudcd1Q6PIP5 582 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Alkbh8Q80Y20 664 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Ddhd1Q80YA3 547 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 HadhaQ8BMS1 763 aaKnown RBP22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Acap1Q8K2H4 740 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 NcaldQ91X97 193 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Anxa13Q99JG3 317 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Ccdc70Q9D9B0 223 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Thap11Q9JJD0 305 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Cyp2g1Q9WV19 494 aa22.49■■□□□ 1.19
Scn1b-201ENSMUST00000098548 Crybg1A0A0G2JG52 2065 aa22.48■■□□□ 1.19
Scn1b-201ENSMUST00000098548 A0A1L1STL9 112 aa22.48■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms