RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Psmd9Q9CR00 222 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Q9D112 206 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Creb3l4Q9D2A5 370 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Taf7lQ9D3R9 471 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ascc1Q9D8Z1 356 aaKnown RBP9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ccdc97Q9DBT3 340 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 CenpfE9Q3P4 2997 aaKnown RBP9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 TprnA2AI08 749 aaKnown RBP9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Vmn2r104E9Q2J5 860 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hs3st1O35310 311 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 P01673 111 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 JunP05627 334 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 TekQ02858 1122 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Pih1d3Q3KNI6 218 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr1152Q7TR34 310 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Efemp1Q8BPB5 493 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Slc6a20aQ8VDB9 592 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 AadacQ99PG0 398 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Psma8Q9CWH6 250 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Slco6d1Q9D5W6 683 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Kctd4Q9D7X1 259 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Slc23a2Q9EPR4 648 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Net1Q9Z206 595 aa9.86□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Brca2P97929 3329 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Mcf2A2AEU1 1111 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gm2237E9Q501 211 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr726E9Q8X3 321 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gm3591K7N6X2 186 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Stc1O55183 247 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 IghgP01863 330 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Timp2P25785 220 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Sstr4P49660 385 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Myl2P51667 166 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Fdft1P53798 416 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 InhbcP55104 352 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Lim2P56563 173 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 F8a1Q00558 380 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr725Q05A45 321 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 PrtgQ2EY15 1191 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Shcbp1lQ3TTP0 639 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Rnf43Q5NCP0 784 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Caprin1Q60865 707 aaKnown RBP9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hif1aQ61221 836 aaKnown RBP9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Fastkd1Q6DI86 829 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Slc16a9Q7TM99 508 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Klhl29Q80T74 875 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Arhgef38Q80VK6 770 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Nrde2Q80XC6 1172 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ankrd9Q8BH83 326 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hectd2Q8CDU6 774 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gdap1l1Q8VE33 370 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Recql5Q8VID5 982 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Snx15Q91WE1 337 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Pcdhgb5Q91XX5 926 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tspan1Q99J59 240 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 1700069L16RikQ9D9H5 109 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ddi1Q9DAF3 408 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 AcadsbQ9DBL1 432 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ndst3Q9EQH7 873 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Ruvbl2Q9WTM5 463 aaKnown RBP9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Myo15bI7HPW8 3033 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Iqca1lA6H690 825 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Vmn2r85G3UW56 850 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Klc2O88448 599 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tgm2P21981 686 aaKnown RBP9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Klkb1P26262 638 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Sox4Q06831 440 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Snx21Q3UR97 363 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Fam160a1Q505K2 1081 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Fam149b1Q6NSV7 578 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Dnajc6Q80TZ3 938 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 HadhaQ8BMS1 763 aaKnown RBP9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 4921511C20RikQ8BVT7 469 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 MdficQ8BX65 247 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Gpat3Q8C0N2 438 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 TwnkQ8CIW5 685 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Hbp1Q8R316 516 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Trappc5Q9CQA1 188 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Lrrc40Q9CRC8 602 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Aldh7a1Q9DBF1 539 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Slc5a3Q9JKZ2 718 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Clcn2Q9R0A1 908 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 AicdaQ9WVE0 198 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Crlf3Q9Z2L7 442 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 D3Ertd254eA0A0G2JEM5 796 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Igkv12-98A0A0G2JGF9 115 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cep85lA0A1W2P884 806 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tgfbr3lD3YZZ2 297 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Rnf169E9Q7F2 694 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr319L7MTY4 306 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Casq2O09161 415 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 P01740 135 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 NcstnP57716 708 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Tex11Q14AT2 947 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Itpripl2Q3UV16 535 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Cage1Q5IR70 849 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Sco1Q5SUC9 284 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Dennd2cQ6P9P8 914 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 Olfr735Q7TRM4 354 aa9.85□□□□□ -0.83
Ccdc38-201ENSMUST00000092215 RbsnQ80Y56 783 aa9.85□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms