RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Cyp2c38P56655 490 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Parp8Q3UD82 852 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 ChpfQ6IQX7 774 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Galnt12Q8BGT9 576 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 PxkQ8BX57 582 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Mrps23Q8VE22 177 aaKnown RBP16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Vmp1Q99KU0 406 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 NarfQ9CYQ7 462 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Piwil1Q9JMB7 862 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Khdrbs2Q9WU01 349 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Rps6ka4Q9Z2B9 773 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 H2afb2S4R1M3 115 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Dhx15O35286 795 aaKnown RBP16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Rab2aP53994 212 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Uimc1Q5U5Q9 727 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Hesx1Q61658 185 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Vps72Q62481 368 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Rasa4Q6PFQ7 802 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 AY358078Q6UY53 465 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Cdkl3Q8BLF2 595 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Epha10Q8BYG9 1007 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Lpin3Q99PI4 848 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Tbx20Q9ES03 445 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Kif1bQ60575 1816 aaKnown RBP16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 A0A286YCQ8 80 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Hoxd12P23812 268 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Tmem173Q3TBT3 378 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Tespa1Q3U132 458 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Zfp957Q3UT76 567 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Dnaaf3Q3UYV8 586 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Prkd1Q62101 918 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Snx8Q8CFD4 459 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Rnf167Q91XF4 347 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Nudt17Q9CWD3 296 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Phf10Q9D8M7 497 aa16.35■□□□□ 0.21
Col17a1-202ENSMUST00000086923 C6E9Q6D8 931 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Limk2O54785 638 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Chrna5Q2MKA5 467 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Rnf43Q5NCP0 784 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Slitrk5Q810B7 957 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Sgpp2Q810K3 354 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Ccdc58Q8R3Q6 144 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Tdrd3Q91W18 743 aaKnown RBP16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Pex6Q99LC9 981 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Mrpl15Q9CPR5 295 aaKnown RBP16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Krt88Q9CPR6 171 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Alg5Q9DB25 324 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Tyk2Q9R117 1184 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 GabreA2AMW3 916 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Sox2P48432 319 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 PitpnaP53810 271 aaKnown RBP16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Cypt2Q6P924 180 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Bhlhe41Q99PV5 410 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 NepnQ9CQ76 512 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Usp54Q8BL06 1588 aaKnown RBP16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Lta4hP24527 611 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Guca1aP43081 202 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Xpnpep1Q6P1B1 623 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 PoliQ6R3M4 717 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 MtdhQ80WJ7 579 aaKnown RBP16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Pink1Q99MQ3 580 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 RhojQ9ER71 214 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Sorcs1Q9JLC4 1167 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Slc39a1Q9QZ03 324 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Lrrc73B2RWC4 316 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Cyp2c69E9PXC3 491 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Gm3095E9Q058 166 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 EnpepP16406 945 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Cep76Q0VEJ0 659 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Kcnk18Q6VV64 394 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Slc9a8Q8R4D1 576 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 TrabdQ99JY4 376 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Mat2bQ99LB6 334 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 9530002B09RikQ9EPV7 135 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 TesminQ9WTJ6 475 aa16.34■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Ssxb6A2BI74 170 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 NagluO88325 739 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 MbP04247 154 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 PfklP12382 780 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Lcp2Q60787 533 aaKnown RBP16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Glt8d2Q640P4 349 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Mea1Q64327 174 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Gpr156Q6PCP7 798 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Klhl5Q6PFE1 708 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Tmc6Q7TN60 810 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Fam76bQ80XP8 339 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Tmem214Q8BM55 687 aaKnown RBP16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Nmur2Q8BZ39 395 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 RadxQ8C779 850 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Ccdc142Q8CAI1 738 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Trex1Q91XB0 314 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Aar2Q9D2V5 384 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 ItpaQ9D892 198 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Cntnap4Q99P47 1310 aa16.33■□□□□ 0.21
Col17a1-202ENSMUST00000086923 Grcc10O35127 126 aa16.33■□□□□ 0.2
Col17a1-202ENSMUST00000086923 Pcsk2P21661 637 aa16.33■□□□□ 0.2
Col17a1-202ENSMUST00000086923 Stat5aP42230 793 aa16.33■□□□□ 0.2
Col17a1-202ENSMUST00000086923 RykQ01887 594 aa16.33■□□□□ 0.2
Col17a1-202ENSMUST00000086923 Smyd5Q3TYX3 416 aa16.33■□□□□ 0.2
Col17a1-202ENSMUST00000086923 Rasgrp3Q6NZH9 691 aa16.33■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms