RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Cyp4a32A2A8T1 509 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 ItgavP43406 1044 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 EpxP49290 716 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 OcmP51879 109 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Lrif1Q8CDD9 755 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Olfr806Q8VFI2 313 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Fars2Q99M01 451 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 OgfrQ99PG2 633 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Asf1aQ9CQE6 204 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Calm4Q9JM83 148 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 CpqQ9WVJ3 470 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Chd5A2A8L1 1946 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Otud3B1AZ99 396 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ctps1P70698 591 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zmat1Q3V0C1 714 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Klra2Q60660 288 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Aif1lQ9EQX4 150 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tcea2Q9QVN7 299 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm42372A0A1B0GT27 204 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Vmn2r120E9PX34 856 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm5798F7BTS7 198 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tbc1d24Q3UUG6 561 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ripk1Q60855 656 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Map4k2Q61161 821 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 OgnQ62000 298 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cyp2c54Q6XVG2 490 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 NrrosQ8BMT4 693 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tmem72Q8C3K5 275 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 GnalQ8CGK7 381 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Clec4a3Q8JZX6 237 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Rsph14Q9D3W1 341 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm21885A0A286YDN8 145 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Rpl22P67984 128 aaKnown RBP11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Serpina3aQ6P4P1 422 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 OsgepQ8BWU5 335 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Q9CPS8 106 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tmem39aQ9CYC3 486 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Kcne2Q9D808 123 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 FarsbQ9WUA2 589 aaKnown RBP11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Rasgef1aA0A0N4SVR5 498 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Arhgap36B1AUC7 590 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm6526G3X9Q9 198 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Capn3Q64691 821 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ube2r2Q6ZWZ2 238 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm6377Q8BHV4 303 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gspt1Q8R050 636 aaKnown RBP11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mtfr1Q99MB2 328 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Armc1Q9D7A8 282 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Vmn2r70K7N702 854 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 PitpnaP53810 271 aaKnown RBP11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gsk3aQ2NL51 490 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Lgr6Q3UVD5 967 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 MarcoQ60754 518 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Rbl1Q64701 1063 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zfp943Q6NZP4 507 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Efcab3Q80X60 432 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Prkag3Q8BGM7 489 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cnot6Q8K3P5 557 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Olfr1502Q8VG66 316 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 LsrQ99KG5 594 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gemin2Q9CQQ4 269 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 RhojQ9ER71 214 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Drg2Q9QXB9 364 aaKnown RBP11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Dpp6Q9Z218 804 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ptpn3A2ALK8 913 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mybpc1D3YU50 1127 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm6205E9PZS2 359 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 E2f2P56931 443 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Bpifa6Q0VGU8 367 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 ParpbpQ6IRT3 573 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Hdac7Q8C2B3 938 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Gm6367Q8C6L9 287 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ugt3a2Q8JZZ0 523 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Slc44a4Q91VA1 707 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Slc15a4Q91W98 574 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mospd2Q9CWP6 518 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Dip2cE9PWR4 1557 aa11.87□□□□□ -0.51
Trim56-201ENSMUST00000054384 Zfp952B0V2W4 504 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Serpinf1P97298 417 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mfsd8Q8BH31 519 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Wasf2Q8BH43 497 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Olfr700Q8VFM5 316 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cndp2Q9D1A2 475 aaKnown RBP11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 AdaP03958 352 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Hoxa2P31245 372 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Txnl4aP83877 142 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Galnt7Q80VA0 657 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Cib1Q9Z0F4 191 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Nav1Q8CH77 1875 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Mxd1P50538 227 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 P4ha2Q60716 537 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Papss1Q60967 624 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 XiapQ60989 496 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Angptl1Q640P2 490 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Ankrd52Q8BTI7 1076 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 MiosQ8VE19 875 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Tlr6Q9EPW9 795 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 XkQ9QXY7 446 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Vmn2r72D3Z4N8 856 aa11.86□□□□□ -0.51
Trim56-201ENSMUST00000054384 Slc28a1E9PXX9 648 aa11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms