RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Ttc23lA6H6E9 458 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 AldoaP05064 364 aaKnown RBP20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Slc2a7P0C6A1 513 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Lire1P11260 357 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 VegfcP97953 415 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Yy2Q3TTC2 378 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Slc22a16Q497L8 649 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Znf148Q61624 794 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gm5414Q6IFZ8 552 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Zfp719Q8BIV1 735 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Vmn1r18Q8R2C8 299 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Dus2Q9D7B1 493 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Nme3Q9WV85 169 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Pcna-ps2A0A140T8V5 261 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Vmn2r96E9PZU5 664 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 LtfP08071 707 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 PcnaP17918 261 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Slc16a1P53986 493 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Tubgcp3P58854 905 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Larp7Q05CL8 570 aaKnown RBP20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Cd36Q08857 472 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gm853Q3UNZ2 425 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 StyxQ60969 223 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Rbm22Q8BHS3 420 aaKnown RBP20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gpr61Q8C010 449 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Tbl3Q8C4J7 801 aaKnown RBP20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Sirt5Q8K2C6 310 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Il1rl2Q9ERS7 574 aa20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Habp4Q9JKS5 411 aaKnown RBP20.25■□□□□ 0.83
Trim47-201ENSMUST00000021120 Cyp2b19O55071 492 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Dnmt3aO88508 908 aaKnown RBP20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Psmd3P14685 530 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Mpp1P70290 466 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Cep295nlQ497N6 533 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Rxfp4Q7TQP4 414 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Sfrp1Q8C4U3 314 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Pitrm1Q8K411 1036 aaKnown RBP20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Agap3Q8VHH5 910 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Stk33Q924X7 491 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 LiasQ99M04 373 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Mccc1Q99MR8 717 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 KlbQ99N32 1043 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 DtnaQ9D2N4 746 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Echdc3Q9D7J9 300 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Cab39lQ9DB16 337 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 HephQ9Z0Z4 1157 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Eml5Q8BQM8 1977 aa20.24■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gm13089A2AGW7 455 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Tmem245B1AZA5 876 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Vmn2r86G5E8Y4 848 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Aldh1a7O35945 501 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Psma3O70435 255 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ctbp1O88712 441 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Tuba4aP68368 448 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gjb5Q02739 271 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Lrfn1Q2WF71 766 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Micall2Q3TN34 1009 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Foxred2Q3USW5 665 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Akap14Q3V0I7 536 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Cdc14bQ6PFY9 485 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Maml1Q6T264 1020 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Zmpste24Q80W54 475 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Smoc1Q8BLY1 463 aaKnown RBP20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Slc44a2Q8BY89 706 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Thop1Q8C1A5 687 aaKnown RBP20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Wdr37Q8CBE3 496 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Mtnr1bQ8CIQ6 364 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Lurap1lQ8K2P1 221 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Golm1Q91XA2 393 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ssxb1Q9CPU1 170 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Tma16Q9CR02 221 aaKnown RBP20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Efhc2Q9D485 750 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Trpc4apQ9JLV2 797 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ptk2bQ9QVP9 1009 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gm17615E9Q9P2 165 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Gm7073E9QAS1 335 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Vmn2r70K7N702 854 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Prox1P48437 737 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 StacP97306 403 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ncf4P97369 339 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Cyb5r2Q3KNK3 276 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Susd6Q8BGE4 302 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Timm29Q8BGX2 266 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Adprhl2Q8CG72 370 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Pnpla8Q8K1N1 776 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Rad51cQ924H5 366 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Tmem135Q9CYV5 458 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Agpat3Q9D517 376 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Necab3Q9D6J4 353 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 Hao2Q9NYQ2 353 aa20.23■□□□□ 0.83
Trim47-201ENSMUST00000021120 RhoP15409 348 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Adra2bP30545 450 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ppp3cbP48453 525 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Psme3P61290 254 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Nol9Q3TZX8 714 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Lmf1Q3U3R4 574 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Ankrd27Q3UMR0 1048 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Rab26Q504M8 260 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Afap1l2Q5DTU0 825 aa20.22■□□□□ 0.83
Trim47-201ENSMUST00000021120 Msantd1Q8BIL2 278 aa20.22■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms