RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm6657A0A1B0GRJ3 277 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Csf2rbP26955 896 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Acvr1P37172 509 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Khdrbs1Q60749 443 aaKnown RBP16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Olfr1062Q7TR71 315 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Chst8Q8BQ86 417 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Znf451Q8C0P7 1056 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Pi4k2bQ8CBQ5 469 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Phf10Q9D8M7 497 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tnfaip8l2Q9D8Y7 184 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Cntnap3E9PY62 1287 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Eddm13E9Q7F5 164 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Dnal1Q05A62 190 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 TchpQ3TVW5 497 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mapre1Q61166 268 aaKnown RBP16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gykl1Q8C635 549 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Pth2rQ91V95 546 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Vwa8Q8CC88 1905 aa16.76■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tnfrsf25B1AWN9 411 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Klf10O89091 479 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fth1P09528 182 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Aff3P51827 1254 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 MamstrQ0ZCJ7 421 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fam189a2Q4FZH1 290 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Sfmbt2Q5DTW2 938 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fgfr3Q61851 801 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Q6GQU0 248 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Stmnd1Q6P3A1 279 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tspan12Q8BKT6 305 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fra10ac1Q8BP78 315 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Zmiz2Q8CIE2 920 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tbc1d15Q9CXF4 671 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tex28B1AYN9 409 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 FancfE9Q5Z5 343 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Bard1O70445 765 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 PdgfrbP05622 1098 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Csf2rb2P26954 878 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Cap1P40124 474 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Naf1Q3UMQ8 489 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ipcef1Q5DU31 406 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Bhlhb9Q6PB60 539 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ubtd2Q6PGH0 234 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Rpp38Q80UU2 280 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tex13c3Q810P0 219 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Pcdhb21Q91V48 774 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Cdca7Q9D0M2 382 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tmem80Q9D3H0 123 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Slfn2Q9Z0I6 378 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Znf711A2ANX9 761 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Olfr1303A2AVW1 312 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 ZxdbA2CE44 873 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Dennd5bA2RSQ0 1274 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 AlyrefO08583 255 aaKnown RBP16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tacr2P30549 384 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Sephs2P97364 452 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Trappc3lQ4KL14 181 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fscn1Q61553 493 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 PostnQ62009 838 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tusc1Q673H1 205 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Olfr698Q7TRN4 311 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Lgals12Q91VD1 314 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Clcn5Q9WVD4 746 aa16.75■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gm29106A0A087WSP8 697 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Smim17A0A504 109 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gm3336J3QMQ6 198 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Sypl2O89104 264 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Hspa1bP17879 642 aaKnown RBP16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 AhcyP50247 432 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 PhexP70669 749 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Hhla1Q3TYV2 514 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Maml1Q6T264 1020 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Phf24Q80TL4 400 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Klf11Q8K1S5 502 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Dap3Q9ER88 391 aaKnown RBP16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Klhl18A0A0G2JGN5 579 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gm3147A0A0J9YU88 481 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tnip3A0A1D5RMN0 279 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gm20828J3KMI7 228 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Trdmt1O55055 415 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Sap25Q1EHW4 186 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Rbms3Q8BWL5 431 aaKnown RBP16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Smoc2Q8CD91 447 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Celf3Q8CIN6 465 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Olfr801Q8VEU1 318 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Cyp4f15Q99N18 534 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Mau2Q9D2X5 619 aaKnown RBP16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Kcne5Q9QZ26 143 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Katna1Q9WV86 491 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Kcnj2P35561 428 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Gucy2eP52785 1108 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Map3k7clP58500 142 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tstd2Q3U269 495 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Fam83fQ3UKU4 495 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Lcp1Q61233 627 aaKnown RBP16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Sv2cQ69ZS6 727 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Ints6Q6PCM2 883 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Zfp418Q8BFS8 652 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Znf467Q8JZL0 594 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Tmem246Q91YV9 403 aa16.74■□□□□ 0.27
Ctcf-201ENSMUST00000005841 Q9CXL3 195 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms