RNA–Protein interactions for RNA: ENST00000641549.1

PTPRVP-205, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

BASIC

Gene PTPRVP, Length 5,067 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-205ENST00000641549 GPR33Q49SQ1 333 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 SERPINA9Q86WD7 417 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 C19orf18Q8NEA5 215 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 OR2T12Q8NG77 320 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 SCAMP5Q8TAC9 235 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 CLEC4CQ8WTT0 213 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 ADI1Q9BV57 179 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 RERGLQ9H628 205 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 IPPKQ9H8X2 491 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 EXD2Q9NVH0 621 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 CLN6Q9NWW5 311 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 INSL6Q9Y581 213 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 PCDHGB3Q9Y5G1 929 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 VIRMAQ69YN4 1812 aaKnown RBP13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 H0Y858 1186 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 AP3D1O14617 1153 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 SUV39H1O43463 412 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 ERAL1O75616 437 aaKnown RBP13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 KIR3DL1P43629 444 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 C21orf59P57076 290 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 LDLRAP1Q5SW96 308 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 CLVS1Q8IUQ0 354 aaPredicted RBP13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 TNKS2Q9H2K2 1166 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 NMUR1Q9HB89 426 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 CNTN6Q9UQ52 1028 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 SCML2Q9UQR0 700 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 SQORQ9Y6N5 450 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 ADAMTSL3P82987 1691 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 SMIM31A0A1B0GVY4 71 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 LRRC72A6NJI9 287 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 RNASEH2AO75792 299 aaKnown RBP13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 CST1P01037 141 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 TRBC1P01850 177 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 RPL17P18621 184 aaKnown RBP13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 DLG2Q15700 870 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 NRF1Q16656 503 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 GALNT13Q8IUC8 556 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 VMP1Q96GC9 406 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 ZNF514Q96K75 400 aaPredicted RBP13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 PRICKLE1Q96MT3 831 aaPredicted RBP13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 MRPS17Q9Y2R5 130 aaKnown RBP13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 FCF1Q9Y324 198 aaKnown RBP13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 YIPF1Q9Y548 306 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 GMPPBQ9Y5P6 360 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 FPGSQ05932 587 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 ARL13AQ5H913 290 aaPredicted RBP13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 MACC1Q6ZN28 852 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 VN1R5Q7Z5H4 357 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 MYDGFQ969H8 173 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 PCBD2Q9H0N5 130 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 ZC4H2Q9NQZ6 224 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 POLR1DQ9Y2S0 133 aa13.37□□□□□ -0.27
PTPRVP-205ENST00000641549 CENPXA8MT69 81 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 CCNA2P20248 432 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 C4BPBP20851 252 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 HNF4AP41235 474 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 POLR2JP52435 117 aaKnown RBP13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 ATP13A5Q4VNC0 1218 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 BROXQ5VW32 411 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 SYPL2Q5VXT5 272 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 DNAJB7Q7Z6W7 309 aaPredicted RBP13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 C7orf61Q8IZ16 206 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 SFRP1Q8N474 314 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 POMGNT2Q8NAT1 580 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 OR4A15Q8NGL6 344 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 REXO5Q96IC2 774 aaKnown RBP13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 SMOC2Q9H3U7 446 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 RAB23Q9ULC3 237 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 GSTK1Q9Y2Q3 226 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 FAM25AB3EWG3 89 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 FAM25CB3EWG5 89 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 FAM25GB3EWG6 89 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 ENTPD5O75356 428 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 KRT36O76013 467 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 PFKMP08237 780 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 ITPKAP23677 461 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 FEN1P39748 380 aaKnown RBP13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 UGT2B15P54855 530 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 GDF10P55107 478 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 MANFP55145 182 aaKnown RBP13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 PPM1JQ5JR12 505 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 GALNT18Q6P9A2 607 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 NAT8LQ8N9F0 302 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 RNF39Q9H2S5 420 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 TRIT1Q9H3H1 467 aaKnown RBP13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 SERHL2Q9H4I8 314 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 WDR55Q9H6Y2 383 aaPredicted RBP13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 FANCEQ9HB96 536 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 SERHLQ9NQF3 203 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 TRPS1Q9UHF7 1281 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 SNX10Q9Y5X0 201 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 IDH2P48735 452 aaKnown RBP13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 TCEAL1Q15170 157 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 LACTB2Q53H82 288 aaPredicted RBP13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 BANPQ8N9N5 519 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 SCLYQ96I15 445 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 TDRD1Q9BXT4 1180 aaKnown RBP13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 POLR1BQ9H9Y6 1135 aa13.36□□□□□ -0.27
PTPRVP-205ENST00000641549 ARL8BQ9NVJ2 186 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms