RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 USP18Q9UMW8 372 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 FNDC3AQ9Y2H6 1198 aaKnown RBP11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 COPG1Q9Y678 874 aaKnown RBP11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 C2CD4BA6NLJ0 364 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 MYO1GB0I1T2 1018 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 GPR182O15218 404 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 METTL18O95568 372 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 ITGB1P05556 798 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 UQCRC1P31930 480 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 ZNF135P52742 658 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 POU6F2P78424 691 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 TRAF3Q13114 568 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 CRY1Q16526 586 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 SV2CQ496J9 727 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 VPS26BQ4G0F5 336 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 FBXO48Q5FWF7 155 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 SIGIRRQ6IA17 410 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 GALNT5Q7Z7M9 940 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 RNF180Q86T96 592 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 ABI1Q8IZP0 508 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 TMEM102Q8N9M5 508 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 PCSK9Q8NBP7 692 aaKnown RBP11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 MZB1Q8WU39 189 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 LINC01599Q8WXQ3 324 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 SEPT8Q92599 483 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 ITCHQ96J02 903 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 MAP6Q96JE9 813 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 MAGEB5Q9BZ81 275 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 MUC3BQ9H195 1237 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 ATP13A3Q9H7F0 1226 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 RIC8BQ9NVN3 520 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 KLHL8Q9P2G9 620 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 EVLQ9UI08 416 aaPredicted RBP11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 OGDHLQ9ULD0 1010 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 PCDHGA11Q9Y5H2 935 aa11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 TDRD15B5MCY1 1934 aaKnown RBP11.8□□□□□ -0.52
RBFOX1-224ENST00000641259 APOL1O14791 398 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 PRKD3O94806 890 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 WDR47O94967 919 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 ARNTP27540 789 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 TGFBR1P36897 503 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 ATXN1P54253 815 aaKnown RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 RHDQ02161 417 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 IFRD2Q12894 506 aaPredicted RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 HERC3Q15034 1050 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 C6orf10Q5SRN2 563 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 SPESP1Q6UW49 350 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 LYPD8Q6UX82 237 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 CD300LGQ6UXG3 332 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 CYP2U1Q7Z449 544 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 UNC93AQ86WB7 457 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 CARM1Q86X55 608 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 RELL1Q8IUW5 271 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 CRYBG2Q8N1P7 616 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 CELF2-AS1Q8N7Q2 184 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 KCTD4Q8WVF5 259 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 FAM149B1Q96BN6 582 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 RMDN1Q96DB5 314 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 YME1L1Q96TA2 773 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 IL37Q9NZH6 218 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 ZNF224Q9NZL3 707 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 ZDHHC2Q9UIJ5 367 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 PTCH2Q9Y6C5 1203 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 I3L521 148 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 TP53P04637 393 aaPredicted RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 THP07101 528 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 MYL4P12829 197 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 PLA2G16P53816 162 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 TAP1Q03518 808 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 OXA1LQ15070 435 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 FAM83EQ2M2I3 478 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 SAMD4BQ5PRF9 694 aaKnown RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 ARHGAP17Q68EM7 881 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 CTU1Q7Z7A3 348 aaKnown RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 HORMAD1Q86X24 394 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 SCML4Q8N228 414 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 B3GALNT2Q8NCR0 500 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 FBXO30Q8TB52 745 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 PIK3R3Q92569 461 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 NKD2Q969F2 451 aaPredicted RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 ACAT2Q9BWD1 397 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 RHOBTB2Q9BYZ6 727 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 NUAK2Q9H093 628 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 RASSF1Q9NS23 344 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 THG1LQ9NWX6 298 aaKnown RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 KIAA1257Q9ULG3 409 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 NOD1Q9Y239 953 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 KLHL20Q9Y2M5 609 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 ORC6Q9Y5N6 252 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 TEX264Q9Y6I9 313 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 SUPT7LO94864 414 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 PNPLA4P41247 253 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 SIM2Q14190 667 aaPredicted RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 UPP1Q16831 310 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 MRPL10Q7Z7H8 261 aaKnown RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 C8orf59Q8N0T1 100 aaPredicted RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 PXYLP1Q8TE99 480 aa11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 ACE2Q9BYF1 805 aaPredicted RBP11.79□□□□□ -0.52
RBFOX1-224ENST00000641259 DNAI2Q9GZS0 605 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms