RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 ZNF570Q96NI8 536 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 CSF3RQ99062 836 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 MAGEE1Q9HCI5 957 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 BPIFA1Q9NP55 256 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 PLSCR4Q9NRQ2 329 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 PPP1R14DQ9NXH3 145 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 RCOR1Q9UKL0 485 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 CDC14AQ9UNH5 594 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 LSM4Q9Y4Z0 139 aaKnown RBP3.22□□□□□ -1.89
ATM-230ENST00000640388 COL4A4P53420 1690 aaPredicted RBP3.22□□□□□ -1.89
ATM-230ENST00000640388 ARFGEF2Q9Y6D5 1785 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 NRXN2Q9P2S2 1712 aa3.22□□□□□ -1.89
ATM-230ENST00000640388 RIF1Q5UIP0 2472 aaKnown RBP3.21□□□□□ -1.89
ATM-230ENST00000640388 LOC400499M0QZD8 3231 aa3.21□□□□□ -1.89
ATM-230ENST00000640388 GVINP1Q7Z2Y8 2422 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 CCDC196A0A1B0GTZ2 297 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 IFITM10A6NMD0 228 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 NPIPB11E5RHQ5 1161 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 IFNL4K9M1U5 179 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 WNT9BO14905 357 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 CREB3O43889 395 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 MT-CYBP00156 380 aaPredicted RBP3.21□□□□□ -1.9
ATM-230ENST00000640388 TFP02787 698 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 IGHV4-30-4P0DP06 118 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 IRF1P10914 325 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 CD58P19256 250 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 AGAP20933 346 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 GPTP24298 496 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 CHATP28329 748 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 HNRNPH1P31943 449 aaKnown RBP3.21□□□□□ -1.9
ATM-230ENST00000640388 STX2P32856 288 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 EPS15P42566 896 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 SNTA1Q13424 505 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 RNPS1Q15287 305 aaKnown RBP3.21□□□□□ -1.9
ATM-230ENST00000640388 EFNB3Q15768 340 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 CALCRLQ16602 461 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 BAK1Q16611 211 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 TCTN1Q2MV58 587 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 MMEL1Q495T6 779 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 ASCL5Q7RTU5 278 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 NR2C2APQ86WQ0 139 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 HEATR4Q86WZ0 1026 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 SCCPDHQ8NBX0 429 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 AGBL3Q8NEM8 1001 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 SPATA18Q8TC71 538 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 CREB3L4Q8TEY5 395 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 ST8SIA4Q92187 359 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 RMDN1Q96DB5 314 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 IGSF21Q96ID5 467 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 DUX5Q96PT3 197 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 OR1F2PQ96R84 312 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 KXD1Q9BQD3 176 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 RETREG1Q9H6L5 497 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 GAREM1Q9H706 876 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 DDX31Q9H8H2 851 aaKnown RBP3.21□□□□□ -1.9
ATM-230ENST00000640388 NOX4Q9NPH5 578 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 WASH6PQ9NQA3 447 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 DDX4Q9NQI0 724 aaKnown RBP3.21□□□□□ -1.9
ATM-230ENST00000640388 SLCO3A1Q9UIG8 710 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 SLC13A4Q9UKG4 626 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 ARHGAP26Q9UNA1 814 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 CRYL1Q9Y2S2 319 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 CYP46A1Q9Y6A2 500 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 KMT2EQ8IZD2 1858 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 ANKRD31Q8N7Z5 1873 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 CCDC7Q96M83 1385 aa3.21□□□□□ -1.9
ATM-230ENST00000640388 ATXN2Q99700 1313 aaKnown RBP3.2□□□□□ -1.9
ATM-230ENST00000640388 SAA2-SAA4A0A096LPE2 208 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 CPED1A4D0V7 1026 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 NPHP1O15259 732 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 SLC16A5O15375 505 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 NDUFS7O75251 213 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 GAGE7O76087 117 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 CLDN14O95500 239 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 MMP2P08253 660 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 GAGE12FP0CL80 117 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 GAGE12GP0CL81 117 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 GAGE12IP0CL82 117 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 ABCD3P28288 659 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 SHMT1P34896 483 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 GNAQP50148 359 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 ERVFC1-1P60608 527 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 TMF1P82094 1093 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 GAGE1Q13065 139 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 GAGE4Q13068 117 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 AMZ1Q400G9 498 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 SETMARQ53H47 684 aaPredicted RBP3.2□□□□□ -1.9
ATM-230ENST00000640388 SGO1Q5FBB7 561 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 TXNDC8Q6A555 127 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 ANKRD54Q6NXT1 300 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 LCTLQ6UWM7 567 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 SLC35F3Q8IY50 421 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 BEST2Q8NFU1 509 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 CD99L2Q8TCZ2 262 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 KLHL29Q96CT2 875 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 C3orf30Q96M34 536 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 EIF2AK1Q9BQI3 630 aaKnown RBP3.2□□□□□ -1.9
ATM-230ENST00000640388 H2AFJQ9BTM1 129 aa3.2□□□□□ -1.9
ATM-230ENST00000640388 KCND2Q9NZV8 630 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms