RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 NUS1Q96E22 293 aa10.96□□□□□ -0.65
SCN1B-208ENST00000640135 DEPDC7Q96QD5 511 aa10.96□□□□□ -0.65
SCN1B-208ENST00000640135 TEFMQ96QE5 360 aaKnown RBP10.96□□□□□ -0.65
SCN1B-208ENST00000640135 VRTNQ9H8Y1 702 aa10.96□□□□□ -0.65
SCN1B-208ENST00000640135 SPAG4Q9NPE6 437 aa10.96□□□□□ -0.65
SCN1B-208ENST00000640135 TBC1D23Q9NUY8 699 aa10.96□□□□□ -0.65
SCN1B-208ENST00000640135 HMGXB4Q9UGU5 601 aa10.96□□□□□ -0.65
SCN1B-208ENST00000640135 MAN2B1O00754 1011 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 CHRNB2P17787 502 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 BMP7P18075 431 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 TAF13Q15543 124 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 C2orf27AQ580R0 203 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 CCNYL2Q5T2Q4 361 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 TXNDC8Q6A555 127 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 FBXL22Q6P050 247 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 EXOC3L1Q86VI1 746 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 DCAF4L2Q8NA75 395 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 PCDH19Q8TAB3 1148 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 ADAMTS15Q8TE58 950 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 CPT1BQ92523 772 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 MIPEPQ99797 713 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 SRMSQ9H3Y6 488 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 PTPRHQ9HD43 1115 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 CHRAC1Q9NRG0 131 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 GKN1Q9NS71 199 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 PCDHGA11Q9Y5H2 935 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 TPP2P29144 1249 aaPredicted RBP10.96□□□□□ -0.66
SCN1B-208ENST00000640135 COL9A3Q14050 684 aaPredicted RBP10.96□□□□□ -0.66
SCN1B-208ENST00000640135 C9orf64Q5T6V5 341 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 ZNF783Q6ZMS7 281 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 PEX5LQ8IYB4 626 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 MOSPD2Q8NHP6 518 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 DENND1AQ8TEH3 1009 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 RPL10LQ96L21 214 aaKnown RBP10.96□□□□□ -0.66
SCN1B-208ENST00000640135 CNBD2Q96M20 576 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 TBCDQ9BTW9 1192 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 ERVK-5Q9HDB9 667 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 DTLQ9NZJ0 730 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 BACE2Q9Y5Z0 518 aa10.96□□□□□ -0.66
SCN1B-208ENST00000640135 CHURC1-FNTBB4DL54 471 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 PIRO00625 290 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 KRT33AO76009 404 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 RPS24P62847 133 aaKnown RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 ERICH5Q6P6B1 374 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 VN1R5Q7Z5H4 357 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 CUZD1Q86UP6 607 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 ZC3H7AQ8IWR0 971 aaKnown RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 TMEM192Q8IY95 271 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 ZNF276Q8N554 614 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 SLC35F5Q8WV83 523 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 HMGB4Q8WW32 186 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 NACC2Q96BF6 587 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 HHIPL1Q96JK4 782 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 Q96MT0 163 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 KLHL3Q9UH77 587 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 SLC22A3O75751 556 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 ZNF865P0CJ78 1059 aaPredicted RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 SLC6A2P23975 617 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 IGFALSP35858 605 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 CDC42P60953 191 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 EIF3MQ7L2H7 374 aaKnown RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 ZNF605Q86T29 641 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 TMC8Q8IU68 726 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 NRSN1Q8IZ57 195 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 LRRC57Q8N9N7 239 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 CMASQ8NFW8 434 aaPredicted RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 ZNF516Q92618 1163 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 SLC38A2Q96QD8 506 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 TTYH3Q9C0H2 523 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 LRTM1Q9HBL6 345 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 LRRC4CQ9HCJ2 640 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 SAGE1Q9NXZ1 904 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 RGS17Q9UGC6 210 aaPredicted RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 CYBAP13498 195 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 GNAZP19086 355 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 AVPR1BP47901 424 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 TM4SF4P48230 202 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 PSMD4P55036 377 aaKnown RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 TNK2Q07912 1038 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 SEMA5AQ13591 1074 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 TTC23Q5W5X9 447 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 TYW3Q6IPR3 259 aaKnown RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 GRASPQ7Z6J2 395 aaPredicted RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 AUTS2Q8WXX7 1259 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 OR52E6Q96RD3 313 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 CDCA3Q99618 268 aaPredicted RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 LPIN3Q9BQK8 851 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 CNPPD1Q9BV87 410 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 GSDMCQ9BYG8 508 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 CAB39Q9Y376 341 aaPredicted RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 REXO2Q9Y3B8 237 aaKnown RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 COPG1Q9Y678 874 aaKnown RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.95□□□□□ -0.66
SCN1B-208ENST00000640135 OR2AG2A6NM03 316 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 ADH1BP00325 375 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 BPGMP07738 259 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 SERPINA6P08185 405 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 ITGA1P56199 1179 aa10.95□□□□□ -0.66
SCN1B-208ENST00000640135 NR1D2Q14995 579 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms