RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CCNA1P78396 465 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 MTMR1Q13613 665 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 MEP1AQ16819 746 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 DDR2Q16832 855 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 TBRG1Q3YBR2 411 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 TBC1D10BQ4KMP7 808 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-221ENST00000638141 TPRG1LQ5T0D9 272 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 PIK3R6Q5UE93 754 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 ZNF517Q6ZMY9 492 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-221ENST00000638141 CREB3L2Q70SY1 520 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 PROSER1Q86XN7 944 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 RAB43Q86YS6 212 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 GTF2H4Q92759 462 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 SH3KBP1Q96B97 665 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 HSFY1Q96LI6 401 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 MBOAT4Q96T53 435 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 GPR22Q99680 433 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 UQCC2Q9BRT2 126 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 DCSTAMPQ9H295 470 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 EML4Q9HC35 981 aaKnown RBP11.94□□□□□ -0.5
CAPN3-221ENST00000638141 TIGARQ9NQ88 270 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 EGFL7Q9UHF1 273 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 SNX2O60749 519 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 HOXB1P14653 301 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-221ENST00000638141 GPX3P22352 226 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 EEFSECP57772 596 aaKnown RBP11.94□□□□□ -0.5
CAPN3-221ENST00000638141 CLCA4Q14CN2 919 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 ACAP2Q15057 778 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 ZIK1Q3SY52 487 aaPredicted RBP11.94□□□□□ -0.5
CAPN3-221ENST00000638141 TOR2AQ5JU69 321 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 RBM20Q5T481 1227 aaKnown RBP11.94□□□□□ -0.5
CAPN3-221ENST00000638141 ZNF691Q5VV52 312 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 TIGD3Q6B0B8 471 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 TCTE3Q8IZS6 198 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 AMER2Q8N7J2 671 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 SLC7A6Q92536 515 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 SNAPC3Q92966 411 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 NCLNQ969V3 563 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 TTYH2Q9BSA4 534 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.94□□□□□ -0.5
CAPN3-221ENST00000638141 HCN4Q9Y3Q4 1203 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 HES2Q9Y543 173 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 PCDHGB2Q9Y5G2 931 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 PEX16Q9Y5Y5 336 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 SSC5DA1L4H1 1573 aa11.94□□□□□ -0.5
CAPN3-221ENST00000638141 E2F8A0AVK6 867 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TYW5A2RUC4 315 aaKnown RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TMEM233B4DJY2 109 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 PLK4O00444 970 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 ANGPT2O15123 496 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 ARHGEF9O43307 516 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 CD4P01730 458 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 SLC26A3P40879 764 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 SERPINH1P50454 418 aaKnown RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TPD52P55327 224 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TNK1Q13470 666 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 PRPSAP1Q14558 356 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 ZC3H12BQ5HYM0 836 aaKnown RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 FAM102AQ5T9C2 384 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 APOBEC3HQ6NTF7 200 aaKnown RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 SPATC1Q76KD6 591 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TMEM135Q86UB9 458 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 ZC3HC1Q86WB0 502 aaKnown RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 SLC22A15Q8IZD6 547 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 NLGN4XQ8N0W4 816 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 LRRC20Q8TCA0 184 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 HTR3CQ8WXA8 447 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 CCDC126Q96EE4 140 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TOE1Q96GM8 510 aaKnown RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TM9SF2Q99805 663 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 SMOC2Q9H3U7 446 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 FAM124BQ9H5Z6 455 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 NIPAL2Q9H841 368 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 BTBD3Q9Y2F9 522 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 AP3M1Q9Y2T2 418 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 PCDHGA10Q9Y5H3 936 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TMEM150BA6NC51 233 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 EFCAB9A8MZ26 197 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 SLC16A6O15403 523 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 OR7A10O76100 309 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 MATN4O95460 622 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 ACADMP11310 421 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 PDGFRAP16234 1089 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 HTR1EP28566 365 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 GTF2E2P29084 291 aaKnown RBP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 ALDH4A1P30038 563 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 CD6P30203 668 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TGFBR2P37173 567 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 ASPAP45381 313 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 GSK3BP49841 420 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 GPAT3Q53EU6 434 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 PXDC1Q5TGL8 231 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 LARP4Q71RC2 724 aaKnown RBP eCLIP11.93□□□□□ -0.5
CAPN3-221ENST00000638141 CLEC4FQ8N1N0 589 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 SVOPLQ8N434 492 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 ANKRD53Q8N9V6 530 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 RXFP2Q8WXD0 754 aa11.93□□□□□ -0.5
CAPN3-221ENST00000638141 TMEM125Q96AQ2 219 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms