RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 SRPRAP08240 638 aaKnown RBP4.53□□□□□ -1.68
SCN1A-210ENST00000635776 SLC7A1P30825 629 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 NR1H2P55055 460 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 UBE3AQ05086 875 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 SDHAF4Q5VUM1 108 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PGM2L1Q6PCE3 622 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ZBTB2Q8N680 514 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 FNDC5Q8NAU1 212 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF555Q8NEP9 628 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 OR7D4Q8NG98 312 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 SLC22A17Q8WUG5 538 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 LINGO1Q96FE5 620 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF382Q96SR6 550 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 NDNQ99608 321 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 PAAF1Q9BRP4 392 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 SPATA16Q9BXB7 569 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ACTR8Q9H981 624 aa4.53□□□□□ -1.68
SCN1A-210ENST00000635776 ZNF646O15015 1829 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 AHCYL1O43865 530 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CNTN5O94779 1100 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 KCNH1O95259 989 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 LDLRP01130 860 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PTPN2P17706 415 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 C11orf91Q3C1V1 193 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ZBTB49Q6ZSB9 765 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 MSANTD1Q6ZTZ1 278 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TREML1Q86YW5 311 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 WDR55Q9H6Y2 383 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CCSER2Q9H7U1 834 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CACYBPQ9HB71 228 aaKnown RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ABCB8Q9NUT2 735 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 EBLN1P0CF75 366 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 MPC1LP0DKB6 136 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 GNAZP19086 355 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 POLR2EP19388 210 aaKnown RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CXCR2P25025 360 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 GABRR2P28476 465 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 GNPDA1P46926 289 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TOP3AQ13472 1001 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 HCAR2Q8TDS4 363 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CSGALNACT1Q8TDX6 532 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 QRFPRQ96P65 431 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 GPR21Q99679 349 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 MIPEPQ99797 713 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 STOML2Q9UJZ1 356 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PTBP2Q9UKA9 531 aaKnown RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 DHRS7Q9Y394 339 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 MYH10P35580 1976 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SDHDO14521 159 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TBX10O75333 385 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 STK16O75716 305 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TRIM16O95361 564 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CHRNA4P43681 627 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 APLP1P51693 650 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 EIF4EBP2Q13542 120 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 GALNT3Q14435 633 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TBCELQ5QJ74 424 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PSRC1Q6PGN9 363 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 NCEH1Q6PIU2 408 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 EP400NLQ6ZTU2 488 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TPRG1Q6ZUI0 275 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TTC7BQ86TV6 843 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 KCTD14Q9BQ13 255 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PADI4Q9UM07 663 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PLA2G4CQ9UP65 541 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 FAM50BQ9Y247 325 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SNX13Q9Y5W8 968 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SNX5Q9Y5X3 404 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 MYH9P35579 1960 aaKnown RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 C1orf232A0A0U1RR37 186 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 HMX2A2RU54 273 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 NR5A2O00482 541 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SCELO95171 688 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CLPTM1O96005 669 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CLTBP09497 229 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 BHLHA9Q7RTU4 235 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 DEFB128Q7Z7B8 93 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CENPLQ8N0S6 344 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 MINDY1Q8N5J2 469 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 BHLHE22Q8NFJ8 381 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 OR2T34Q8NGX1 318 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 OR2T3Q8NH03 318 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 LRRN4Q8WUT4 740 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 IGSF8Q969P0 613 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TMEM209Q96SK2 561 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ANLNQ9NQW6 1124 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 CPQQ9Y646 472 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 A0A087WXM4 84 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PRMT3O60678 531 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 STC2O76061 302 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 ABLIM3O94929 683 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 PRNPP04156 253 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 HNRNPLP14866 589 aaKnown RBP eCLIP4.52□□□□□ -1.698e-7■■■□□ 16.4
SCN1A-210ENST00000635776 PCBP2Q15366 365 aaKnown RBP eCLIP4.52□□□□□ -1.691e-9■■■■■ 28.3
SCN1A-210ENST00000635776 SLC9B1Q4ZJI4 515 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 INTS11Q5TA45 600 aaKnown RBP4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TMEM132CQ8N3T6 1108 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 TTC16Q8NEE8 873 aa4.52□□□□□ -1.69
SCN1A-210ENST00000635776 SAMD11Q96NU1 681 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms