RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SLC37A4O43826 429 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TRBC1P01850 177 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 COL6A1P12109 1028 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SRCP12931 536 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 MAGEA2P43356 314 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PPP4CP60510 307 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 EIF5AP63241 154 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PITPNAQ00169 270 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 BNIP2Q12982 314 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SNAPC1Q16533 368 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 AAK1Q2M2I8 961 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SSX6Q7RTT6 188 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SAPCD2Q86UD0 394 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CAND1Q86VP6 1230 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SLC22A17Q8WUG5 538 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SEMA3CQ99985 751 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 NDC1Q9BTX1 674 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SEMA6AQ9H2E6 1030 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PNO1Q9NRX1 252 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PCDHB1Q9Y5F3 818 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SEPT4O43236 478 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 FGF1P05230 155 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SMIM10L2AP0DMW4 78 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SMIM10L2BP0DMW5 78 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 THRBP10828 461 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ADRA1DP25100 572 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 MC4RP32245 332 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 GRK5P34947 590 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 GRIA3P42263 894 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 MAP2K5Q13163 448 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 FAM131AQ6UXB0 335 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SAMD14Q8IZD0 417 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 MCOLN2Q8IZK6 566 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SLC34A3Q8N130 599 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 EIF1ADQ8N9N8 165 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PIGXQ8TBF5 258 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 DNAJB14Q8TBM8 379 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 KLHL6Q8WZ60 621 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 AZIN2Q96A70 460 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 MFSD3Q96ES6 412 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 KCNIP3Q9Y2W7 256 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 RNF17Q9BXT8 1623 aaKnown RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TMEM88BA6NKF7 163 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CCRL2O00421 344 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 FSBPO95073 299 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PGRP06401 933 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CD247P20963 164 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PSMB4P28070 264 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 GLUD2P49448 558 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SCNN1GP51170 649 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 RAB10P61026 200 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 LRRC32Q14392 662 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SPIN3Q5JUX0 258 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 WASHC2DQ5SRD0 308 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 UNQ6126/PRO20091Q6UXV3 157 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 CHST9Q7L1S5 443 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 HID1Q8IV36 788 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ZNF565Q8N9K5 539 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ACER1Q8TDN7 264 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 TCP10LQ8TDR4 215 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PSKH2Q96QS6 385 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 EHD4Q9H223 541 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 PPP1R14DQ9NXH3 145 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 GDAP2Q9NXN4 497 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 GHRLQ9UBU3 117 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 C19orf25Q9UFG5 118 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 RAPGEFL1Q9UHV5 662 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 GGA2Q9UJY4 613 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 ITGB1BP2Q9UKP3 347 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SPIN1Q9Y657 262 aaPredicted RBP5.53□□□□□ -1.52
SCN1A-209ENST00000635750 MYH3P11055 1940 aa5.53□□□□□ -1.52
SCN1A-209ENST00000635750 SLC15A5A6NIM6 579 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 E2F3O00716 465 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 DDX3YO15523 660 aaKnown RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ATP4AP20648 1035 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SLC1A2P43004 574 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 FMR1Q06787 632 aaKnown RBP eCLIP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 DGKZQ13574 1117 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 CDK10Q15131 360 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 NRF1Q16656 503 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TSGA10IPQ3SY00 556 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 C10orf107Q8IVU9 208 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF34Q8IZ26 560 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 POC5Q8NA72 575 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 INO80EQ8NBZ0 244 aaPredicted RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TSTD1Q8NFU3 115 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TAS1R2Q8TE23 839 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 C1GALT1C1Q96EU7 318 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 DGAT2Q96PD7 388 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 KIAA1683Q9H0B3 1180 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 CDH19Q9H159 772 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 OSER1Q9NX31 292 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ATXN2Q99700 1313 aaKnown RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 USP42Q9H9J4 1324 aaKnown RBP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 A0A0A0MRY4 1105 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 TLR5O60602 858 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 ALDH4A1P30038 563 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 SCTRP47872 440 aa5.52□□□□□ -1.53
SCN1A-209ENST00000635750 CPSF6Q16630 551 aaKnown RBP eCLIP5.52□□□□□ -1.53
SCN1A-209ENST00000635750 CELF3Q5SZQ8 465 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms