RNA–Protein interactions for RNA: ENST00000634781.1

SMARCA2-229, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 1 (best) BASIC

Gene SMARCA2, Length 1,106 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-229	ENST00000634781	WAC	Q9BTA9	647 aa		4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	SEZ6L	Q9BYH1	1024 aa		4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CLK4	Q9HAZ1	481 aa	Known RBP	4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	MAGEE1	Q9HCI5	957 aa		4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	HCFC1R1	Q9NWW0	138 aa		4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	OR6C3	Q9NZP0	311 aa		4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	HAO1	Q9UJM8	370 aa		4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	RPS6KA6	Q9UK32	745 aa		4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ZNF711	Q9Y462	761 aa		4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	NFE2L3	Q9Y4A8	694 aa		4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	LSM4	Q9Y4Z0	139 aa	Known RBP	4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	TOPAZ1	Q8N9V7	1692 aa		4.24	□□□□□ -1.73
SMARCA2-229	ENST00000634781	TULP4	Q9NRJ4	1543 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	EIF3CL	B5ME19	914 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	VILL	O15195	856 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	APOA4	P06727	396 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	MMP2	P08253	660 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	SPARC	P09486	303 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CLTB	P09497	229 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	T-ENOL	P0DO92	83 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	TGFB3	P10600	412 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	AGA	P20933	346 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CALR	P27797	417 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	OAS2	P29728	719 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	C21orf33	P30042	268 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CTNNA1	P35221	906 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	PCYT1A	P49585	367 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	KRTAP10-6	P60371	365 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	RPS3A	P61247	264 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	SCARB2	Q14108	478 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CTTN	Q14247	550 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	RASA2	Q15283	850 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	SHB	Q15464	509 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	PLEKHS1	Q5SXH7	462 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	TYW3	Q6IPR3	259 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ZSCAN30	Q86W11	494 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ZDHHC17	Q8IUH5	632 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	DHX40	Q8IX18	779 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	TEX11	Q8IYF3	940 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CNPY4	Q8N129	248 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	TTC39C	Q8N584	583 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	BEST2	Q8NFU1	509 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	B4GALNT2	Q8NHY0	566 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	NEK9	Q8TD19	979 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	FAM216A	Q8WUB2	273 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	THOC3	Q96J01	351 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	TXNDC15	Q96J42	360 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ZPBP	Q9BS86	351 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	SLC25A33	Q9BSK2	321 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	PCDHB16	Q9NRJ7	776 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ACAD8	Q9UKU7	415 aa		4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ZHX1	Q9UKY1	873 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	AGO1	Q9UL18	857 aa	Known RBP	4.23	□□□□□ -1.73
SMARCA2-229	ENST00000634781	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	NPIPB11	E5RHQ5	1161 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	WNT9B	O14905	357 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	BCAT2	O15382	392 aa	Predicted RBP	4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	KLK8	O60259	260 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	BEST1	O76090	585 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CDH2	P19022	906 aa	Predicted RBP	4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	EDN2	P20800	178 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CDA	P32320	146 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	NNMT	P40261	264 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	HADHA	P40939	763 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	EFNA5	P52803	228 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	RAD23B	P54727	409 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	SNX16	P57768	344 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	GRIK3	Q13003	919 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	STK4	Q13043	487 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	AIMP2	Q13155	320 aa	Known RBP	4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	HLF	Q16534	295 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	LRRC8E	Q6NSJ5	796 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CYP20A1	Q6UW02	462 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	LINGO2	Q7L985	606 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	SHF	Q7M4L6	423 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	SZRD1	Q7Z422	152 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	TDRP	Q86YL5	185 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	AADAT	Q8N5Z0	425 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	AGBL3	Q8NEM8	1001 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ELP5	Q8TE02	316 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	AFAP1L1	Q8TED9	768 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	MIB2	Q96AX9	1013 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	FAM149B1	Q96BN6	582 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	PHF21B	Q96EK2	531 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CALML4	Q96GE6	196 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CAMK1G	Q96NX5	476 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	SLITRK1	Q96PX8	696 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	EDEM3	Q9BZQ6	932 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	PLEKHA4	Q9H4M7	779 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ASAH2	Q9NR71	780 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	CISD1	Q9NZ45	108 aa	Known RBP	4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ZNF215	Q9UL58	517 aa	Predicted RBP	4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	AAR2	Q9Y312	384 aa	Known RBP	4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	COL5A2	P05997	1499 aa	Predicted RBP	4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ALS2	Q96Q42	1657 aa		4.22	□□□□□ -1.73
SMARCA2-229	ENST00000634781	ATXN2	Q99700	1313 aa	Known RBP	4.21	□□□□□ -1.73
SMARCA2-229	ENST00000634781	PIK3C2G	O75747	1445 aa		4.21	□□□□□ -1.73
SMARCA2-229	ENST00000634781	LRRC37A3	O60309	1634 aa		4.21	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms