RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 GLT6D1Q7Z4J2 308 aa22.13■■□□□ 1.13
SF1-220ENST00000626028 LIN37Q96GY3 246 aaPredicted RBP22.13■■□□□ 1.13
SF1-220ENST00000626028 ZNF578Q96N58 590 aaPredicted RBP22.13■■□□□ 1.13
SF1-220ENST00000626028 TMEM74Q96NL1 305 aa22.13■■□□□ 1.13
SF1-220ENST00000626028 IL17CQ9P0M4 197 aa22.13■■□□□ 1.13
SF1-220ENST00000626028 RABGEF1Q9UJ41 708 aa22.13■■□□□ 1.13
SF1-220ENST00000626028 PKP3Q9Y446 797 aa22.13■■□□□ 1.13
SF1-220ENST00000626028 PCDHB1Q9Y5F3 818 aa22.13■■□□□ 1.13
SF1-220ENST00000626028 ENTPD2Q9Y5L3 495 aa22.13■■□□□ 1.13
SF1-220ENST00000626028 RNF215Q9Y6U7 377 aa22.13■■□□□ 1.13
SF1-220ENST00000626028 A0A087WV48 116 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 D6RAR5 112 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 AURKAO14965 403 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 CHUKO15111 745 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 RPLP0P05388 317 aaKnown RBP22.12■■□□□ 1.13
SF1-220ENST00000626028 ADRA1AP35348 466 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 FASLGP48023 281 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 ERVPABLB-1P60509 514 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 P3H1Q32P28 736 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 TBC1D25Q3MII6 688 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 SEL1L2Q5TEA6 688 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 ALS2CLQ60I27 953 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 SPRED1Q7Z699 444 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 NAGSQ8N159 534 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 ARL14Q8N4G2 192 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 SLC25A41Q8N5S1 370 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 AVL9Q8NBF6 648 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 SNIP1Q8TAD8 396 aaKnown RBP22.12■■□□□ 1.13
SF1-220ENST00000626028 SLC35B2Q8TB61 432 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 BRSK1Q8TDC3 778 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 FGF11Q92914 225 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 ALS2CR12Q96Q35 445 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 GORASP1Q9BQQ3 440 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 SUDS3Q9H7L9 328 aaPredicted RBP22.12■■□□□ 1.13
SF1-220ENST00000626028 ARNT2Q9HBZ2 717 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 ATXN10Q9UBB4 475 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 FAM208BQ5VWN6 2430 aa22.12■■□□□ 1.13
SF1-220ENST00000626028 A0A1W2PQM1 296 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 RHPN2P1A8MT19 583 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 GRID2O43424 1007 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 BRINP1O60477 761 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 ECEL1O95672 775 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 SLC4A1P02730 911 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 PSMB4P28070 264 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 STIP1P31948 543 aaKnown RBP22.11■■□□□ 1.13
SF1-220ENST00000626028 CCKBRP32239 447 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 SPAM1P38567 509 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 CHRNA4P43681 627 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 CCL7P80098 99 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 ITGA9Q13797 1035 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 TAF1AQ15573 450 aaPredicted RBP22.11■■□□□ 1.13
SF1-220ENST00000626028 PARP6Q2NL67 630 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 MARK2Q7KZI7 788 aaKnown RBP22.11■■□□□ 1.13
SF1-220ENST00000626028 WDR36Q8NI36 951 aaKnown RBP22.11■■□□□ 1.13
SF1-220ENST00000626028 CCDC110Q8TBZ0 833 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 BLOC1S5Q8TDH9 187 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 TMEM159Q96B96 161 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 STRADBQ9C0K7 418 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 C10orf88Q9H8K7 445 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 IL26Q9NPH9 171 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 RAXQ9Y2V3 346 aa22.11■■□□□ 1.13
SF1-220ENST00000626028 CCDC187A0A096LP49 1063 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 OR5K4A6NMS3 321 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 C2orf81A6NN90 581 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 LPOP22079 712 aaPredicted RBP22.1■■□□□ 1.13
SF1-220ENST00000626028 GABREP78334 506 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 BIRC2Q13490 618 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 SQSTM1Q13501 440 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 MEI1Q5TIA1 1274 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 ARHGEF18Q6ZSZ5 1173 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 CHST15Q7LFX5 561 aaPredicted RBP22.1■■□□□ 1.13
SF1-220ENST00000626028 SFRP1Q8N474 314 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 RTP4Q96DX8 246 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 ATXN7L3BQ96GX2 97 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 DPYSL5Q9BPU6 564 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 ZCCHC2Q9C0B9 1178 aaKnown RBP22.1■■□□□ 1.13
SF1-220ENST00000626028 SMOXQ9NWM0 555 aa22.1■■□□□ 1.13
SF1-220ENST00000626028 CELSR3Q9NYQ7 3312 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 KMOO15229 486 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 PSMD3O43242 534 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 KRT37O76014 449 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 CRTAMO95727 393 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 AGTP01019 485 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 ZNF8P17098 575 aaPredicted RBP22.09■■□□□ 1.13
SF1-220ENST00000626028 PDX1P52945 283 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 MAZP56270 477 aaKnown RBP22.09■■□□□ 1.13
SF1-220ENST00000626028 B4GALNT1Q00973 533 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 RPS6KA1Q15418 735 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 ADGRG6Q86SQ4 1221 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 TRIM58Q8NG06 486 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 FAM118BQ9BPY3 351 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 TIMM29Q9BSF4 260 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 FICDQ9BVA6 458 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 OR2AG1Q9H205 316 aa22.09■■□□□ 1.13
SF1-220ENST00000626028 LAMA5O15230 3695 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 KIR2DS5A0A0G2JLQ3 304 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 A0A0G2JNG1 304 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 GLYATL1P3A0A0U1RQE8 302 aa22.08■■□□□ 1.13
SF1-220ENST00000626028 F5H423 210 aaPredicted RBP22.08■■□□□ 1.13
SF1-220ENST00000626028 KIR2DS3K7RE56 304 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms