RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 TOR4AQ9NXH8 423 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 CNOT6Q9ULM6 557 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 ARL5AQ9Y689 179 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 SLC30A1Q9Y6M5 507 aa13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 GOLGA4Q13439 2230 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-216ENST00000626000 MED19A0JLT2 244 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 FAM221BA6H8Z2 402 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 USP27XA6NNY8 438 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 CFAP99D6REC4 459 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 NDC80O14777 642 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 CHUKO15111 745 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 KMOO15229 486 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 GRID2O43424 1007 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 SRP72O76094 671 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 CDK14O94921 469 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 PNLIPP16233 465 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 TPSB2P20231 275 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 COILP38432 576 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 CLCNKAP51800 687 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 BIRC2Q13490 618 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 TPSAB1Q15661 275 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 SMAD1Q15797 465 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 ATP13A5Q4VNC0 1218 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 OGFOD3Q6PK18 319 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 FAM151BQ6UXP7 276 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 SYDE1Q6ZW31 735 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 LRRTM4Q86VH4 590 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 OR4K2Q8NGD2 314 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 ZNF398Q8TD17 642 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 COG1Q8WTW3 980 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 IL22Q9GZX6 179 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 ABCG4Q9H172 646 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 DPEP2Q9H4A9 486 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 STN1Q9H668 368 aaKnown RBP13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 NLE1Q9NVX2 485 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 ZNHIT2Q9UHR6 403 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 PNMA8BQ9ULN7 279 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 PADI4Q9UM07 663 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 GPSM3Q9Y4H4 160 aa13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 DNMT3AQ9Y6K1 912 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-216ENST00000626000 OR5K4A6NMS3 321 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 CCDC188H7C350 402 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 LDB2O43679 373 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 NUDT21O43809 227 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 DNAJC6O75061 913 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 ECEL1O95672 775 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 TUBB4AP04350 444 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 GLB1P16278 677 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 ADRA1DP25100 572 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 PSMA3P25788 255 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 PPARGP37231 505 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 ACTR1BP42025 376 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 MAGEA6P43360 314 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 ACTR1AP61163 376 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 CTBSQ01459 385 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 MSLNQ13421 630 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 NFATC2Q13469 925 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 SEPT6Q14141 434 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 SPARCL1Q14515 664 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 POU6F1Q14863 301 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 CHRNA6Q15825 494 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 CLPPQ16740 277 aaPredicted RBP13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 C14orf28Q4W4Y0 310 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 TMPRSS7Q7RTY8 843 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 SNX20Q7Z614 316 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 SLCO6A1Q86UG4 719 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 TRIM74Q86UV6 250 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 SLC35F3Q8IY50 421 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 PPHLN1Q8NEY8 458 aaKnown RBP13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 GPR156Q8NFN8 814 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 SLCO2A1Q92959 643 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 DCUN1D1Q96GG9 259 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 MS4A14Q96JA4 679 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 TIMM29Q9BSF4 260 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 AP1M1Q9BXS5 423 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 ASB8Q9H765 288 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 CASS4Q9NQ75 786 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 BFARQ9NZS9 450 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 TAAR2Q9P1P5 351 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 ATXN10Q9UBB4 475 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 CRLS1Q9UJA2 301 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 TMEM98Q9Y2Y6 226 aa13.85□□□□□ -0.19
SNRPA1-216ENST00000626000 MROH6A6NGR9 719 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 AGAP14A8MT82 685 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 QSOX1O00391 747 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 TCEA3O75764 348 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 KRT14P02533 472 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 GSTM1P09488 218 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 MSH3P20585 1137 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 KCNJ1P48048 391 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 POLD2P49005 469 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 NPY2RP49146 381 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 ETF1P62495 437 aaKnown RBP13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 GSTM4Q03013 218 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 TMEM115Q12893 351 aaPredicted RBP13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 GPS1Q13098 491 aa13.84□□□□□ -0.19
SNRPA1-216ENST00000626000 DNAJC3Q13217 504 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms