RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CCT8P50990 548 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 KCNK10P57789 538 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 UFM1P61960 85 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 RAD51Q06609 339 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 UGT3A1Q6NUS8 523 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 SYVN1Q86TM6 617 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 OR7D4Q8NG98 312 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 FUBP1Q96AE4 644 aaKnown RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 CENPNQ96H22 339 aaPredicted RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 EXOC2Q96KP1 924 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 TMEM74Q96NL1 305 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 TRIB3Q96RU7 358 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 ACOX2Q99424 681 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 C1orf50Q9BV19 199 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 MUC3BQ9H195 1237 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 ALG2Q9H553 416 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 CCSER2Q9H7U1 834 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 PDFQ9HBH1 243 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 TRMT13Q9NUP7 481 aaKnown RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 NLE1Q9NVX2 485 aaPredicted RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 ZNF225Q9UK10 706 aa11.19□□□□□ -0.62
VARS2-213ENST00000625423 OAS3Q9Y6K5 1087 aaKnown RBP11.19□□□□□ -0.62
VARS2-213ENST00000625423 BTN3A1O00481 513 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 NDUFS3O75489 264 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 BMP10O95393 424 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 RPS17P08708 135 aaKnown RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 TACR2P21452 398 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 RGRP47804 291 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 MAPKAPK2P49137 400 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 KCNQ1P51787 676 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 ZNF140P52738 457 aaPredicted RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 ILF2Q12905 390 aaKnown RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 CTXN3Q4LDR2 81 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 CLLU1OSQ5K130 101 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 GLT6D1Q7Z4J2 308 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 RTN4RL1Q86UN2 441 aaPredicted RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 ERI1Q8IV48 349 aaKnown RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 LGI2Q8N0V4 545 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 DCBLD1Q8N8Z6 715 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 DRAXINQ8NBI3 349 aaPredicted RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 TRPV3Q8NET8 790 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 MDGA1Q8NFP4 955 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 CYGBQ8WWM9 190 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 ZNF599Q96NL3 588 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 KCTD14Q9BQ13 255 aaPredicted RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 C9orf16Q9BUW7 83 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 PREBQ9HCU5 417 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 TLR8Q9NR97 1041 aaKnown RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 IL37Q9NZH6 218 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 VPS4BO75351 444 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 MYF6P23409 242 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 ZFP36L2P47974 494 aaKnown RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 SCNN1BP51168 640 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 LIPEQ05469 1076 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 FOXM1Q08050 763 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 DSC1Q08554 894 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 BTG3Q14201 252 aaPredicted RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 RCAN2Q14206 197 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 ATP6AP1Q15904 470 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 KCNA10Q16322 511 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 RBBP7Q16576 425 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 PTPRNQ16849 979 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 COLGALT2Q8IYK4 626 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 GAB3Q8WWW8 586 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 TRIM54Q9BYV2 358 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 PIF1Q9H611 641 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 ZFYVE28Q9HCC9 887 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 OLA1Q9NTK5 396 aaKnown RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 AIG1Q9NVV5 245 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 USP22Q9UPT9 525 aa11.18□□□□□ -0.62
VARS2-213ENST00000625423 FNDC3AQ9Y2H6 1198 aaKnown RBP11.18□□□□□ -0.62
VARS2-213ENST00000625423 hCG_2014768A0A024R1R8 64 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 ACOX3O15254 700 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 IGLV3-27P01718 113 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 MT-ND1P03886 318 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 PRR35P0CG20 571 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 TRIM32Q13049 653 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 SLC36A3Q495N2 470 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 COQ5Q5HYK3 327 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 OGFOD2Q6N063 350 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 SPATA19Q7Z5L4 167 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 OR2T11Q8NH01 316 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 TRIB2Q92519 343 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 FBXL20Q96IG2 436 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 ZBED2Q9BTP6 218 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 HGH1Q9BTY7 390 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 SPON2Q9BUD6 331 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 RIMKLBQ9ULI2 386 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 FAM92AA1XBS5 289 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 CCDC154A6NI56 674 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 SYCE1LA8MT33 242 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 EI24O14681 340 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 OR1I1O60431 355 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 RPLP2P05387 115 aaKnown RBP11.17□□□□□ -0.62
VARS2-213ENST00000625423 HOXD9P28356 352 aaPredicted RBP11.17□□□□□ -0.62
VARS2-213ENST00000625423 RANBP1P43487 201 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 KCTD21Q4G0X4 260 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 AFTPHQ6ULP2 937 aa11.17□□□□□ -0.62
VARS2-213ENST00000625423 KIAA2013Q8IYS2 634 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms