RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 RALGPS1Q5JS13 557 aa14.51□□□□□ -0.09
PNKP-218ENST00000625299 CYP4V2Q6ZWL3 525 aaPredicted RBP14.51□□□□□ -0.09
PNKP-218ENST00000625299 TRIM48Q8IWZ4 208 aa14.51□□□□□ -0.09
PNKP-218ENST00000625299 TRIM55Q9BYV6 548 aa14.51□□□□□ -0.09
PNKP-218ENST00000625299 TRIM7Q9C029 511 aa14.51□□□□□ -0.09
PNKP-218ENST00000625299 CASS4Q9NQ75 786 aa14.51□□□□□ -0.09
PNKP-218ENST00000625299 OGFRQ9NZT2 677 aa14.51□□□□□ -0.09
PNKP-218ENST00000625299 MAP10Q9P2G4 905 aa14.51□□□□□ -0.09
PNKP-218ENST00000625299 PPIL1Q9Y3C6 166 aa14.51□□□□□ -0.09
PNKP-218ENST00000625299 TTLL3Q9Y4R7 772 aa14.51□□□□□ -0.09
PNKP-218ENST00000625299 A0A0J9YYE9 177 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 GRID2O43424 1007 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 UBXN7O94888 489 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 CLDN7O95471 211 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 VIPP01282 170 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 TRBC1P01850 177 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 GARSP41250 739 aaKnown RBP14.5□□□□□ -0.09
PNKP-218ENST00000625299 LEPRP48357 1165 aaKnown RBP14.5□□□□□ -0.09
PNKP-218ENST00000625299 HCAR3P49019 387 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 PGDP52209 483 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 ZNF135P52742 658 aaPredicted RBP14.5□□□□□ -0.09
PNKP-218ENST00000625299 CDH6P55285 790 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 CHAF1BQ13112 559 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 SEMA5AQ13591 1074 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 SEPT7Q16181 437 aaKnown RBP14.5□□□□□ -0.09
PNKP-218ENST00000625299 PLA2G4EQ3MJ16 856 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 CPZQ66K79 652 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 ZNF787Q6DD87 383 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 AVL9Q8NBF6 648 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 CT55Q8WUE5 264 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 HSPH1Q92598 858 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 PLEKHG4BQ96PX9 1271 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 ACTL8Q9H568 366 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 ARFGAP3Q9NP61 516 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 PADI1Q9ULC6 663 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 CHKBQ9Y259 395 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 ITPR2Q14571 2701 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 SHANK1Q9Y566 2161 aa14.5□□□□□ -0.09
PNKP-218ENST00000625299 CENPEQ02224 2701 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 OR5K4A6NMS3 321 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 FADS2P1A8MWK0 482 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 KIF1CO43896 1103 aaKnown RBP14.49□□□□□ -0.09
PNKP-218ENST00000625299 FZD6O60353 706 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 LRCH4O75427 683 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 SPAG6O75602 509 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 C9P02748 559 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 COL8A1P27658 744 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 UBE2IP63279 158 aaKnown RBP14.49□□□□□ -0.09
PNKP-218ENST00000625299 IL11RAQ14626 422 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 PLEKHA7Q6IQ23 1121 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 FAM92BQ6ZTR7 304 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 TMEM26Q6ZUK4 368 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 NLRP8Q86W28 1048 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 PPP1R3BQ86XI6 285 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 PSTKQ8IV42 348 aaKnown RBP14.49□□□□□ -0.09
PNKP-218ENST00000625299 APLFQ8IW19 511 aaPredicted RBP14.49□□□□□ -0.09
PNKP-218ENST00000625299 RUFY1Q96T51 708 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 SLC25A23Q9BV35 468 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 POLR1EQ9GZS1 481 aaKnown RBP14.49□□□□□ -0.09
PNKP-218ENST00000625299 ZNF768Q9H5H4 540 aaKnown RBP14.49□□□□□ -0.09
PNKP-218ENST00000625299 RMI1Q9H9A7 625 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 LHX9Q9NQ69 397 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 KLC4Q9NSK0 619 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 SCHIP1Q9P0W5 487 aaPredicted RBP14.49□□□□□ -0.09
PNKP-218ENST00000625299 LUZP4Q9P127 313 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 CNOT6Q9ULM6 557 aaKnown RBP14.49□□□□□ -0.09
PNKP-218ENST00000625299 SLC30A1Q9Y6M5 507 aa14.49□□□□□ -0.09
PNKP-218ENST00000625299 TEP1Q99973 2627 aaKnown RBP14.48□□□□□ -0.09
PNKP-218ENST00000625299 C1orf232A0A0U1RR37 186 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 TMEM191CA6NGB0 347 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 ARGFXA6NJG6 315 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 PDZK1P1A8MUH7 402 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 MTA2O94776 668 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 FERP16591 822 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 RPS18P62269 152 aaKnown RBP14.48□□□□□ -0.09
PNKP-218ENST00000625299 DSC2Q02487 901 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 EIF2S3LQ2VIR3 472 aaKnown RBP14.48□□□□□ -0.09
PNKP-218ENST00000625299 PRR30Q53SZ7 412 aaPredicted RBP14.48□□□□□ -0.09
PNKP-218ENST00000625299 TDRD12Q587J7 1177 aaKnown RBP14.48□□□□□ -0.09
PNKP-218ENST00000625299 ZNF648Q5T619 568 aaPredicted RBP14.48□□□□□ -0.09
PNKP-218ENST00000625299 CACHD1Q5VU97 1274 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 CDKAL1Q5VV42 579 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 IRGCQ6NXR0 463 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 CRTC3Q6UUV7 619 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 POLNQ7Z5Q5 900 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 LPCAT1Q8NF37 534 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 CSPG4P5Q96PW8 444 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.48□□□□□ -0.09
PNKP-218ENST00000625299 CUEDC1Q9NWM3 386 aaPredicted RBP14.48□□□□□ -0.09
PNKP-218ENST00000625299 DNPEPQ9ULA0 475 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 DNAJC16Q9Y2G8 782 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 MAP4K5Q9Y4K4 846 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 PCDHGA6Q9Y5G7 932 aa14.48□□□□□ -0.09
PNKP-218ENST00000625299 TOX3O15405 576 aaPredicted RBP14.47□□□□□ -0.09
PNKP-218ENST00000625299 NUAK1O60285 661 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 TIAF1O95411 115 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 MT-ND3P03897 115 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 FGF5P12034 268 aa14.47□□□□□ -0.09
PNKP-218ENST00000625299 ZNF8P17098 575 aaPredicted RBP14.47□□□□□ -0.09
PNKP-218ENST00000625299 IL1R2P27930 398 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms