RNA–Protein interactions for RNA: ENST00000624390.1

LINC00963-219, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 472 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-219ENST00000624390 ZNF8P17098 575 aaPredicted RBP8.28□□□□□ -1.08
LINC00963-219ENST00000624390 VPS41P49754 854 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 BASP1P80723 227 aaKnown RBP8.28□□□□□ -1.08
LINC00963-219ENST00000624390 PDE1BQ01064 536 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 PEX6Q13608 980 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 GTF2H3Q13889 308 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 POU6F1Q14863 301 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 KCTD11Q693B1 232 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 PDPK2PQ6A1A2 396 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 GUSBP11Q6P575 273 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 DRICH1Q6PGQ1 229 aaPredicted RBP8.28□□□□□ -1.08
LINC00963-219ENST00000624390 CRTC3Q6UUV7 619 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 TMPRSS7Q7RTY8 843 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 ADGRG6Q86SQ4 1221 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 NRROSQ86YC3 692 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 PHYKPLQ8IUZ5 450 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 GALNT15Q8N3T1 639 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 RASGEF1CQ8N431 466 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 ARL10Q8N8L6 244 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 Q8N9G6 341 aaPredicted RBP8.28□□□□□ -1.08
LINC00963-219ENST00000624390 KYQ8NBH2 561 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 OR13C4Q8NGS5 318 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 ZDHHC1Q8WTX9 485 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 CAPZA3Q96KX2 299 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 FAM96AQ9H5X1 160 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 ASB8Q9H765 288 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 ARNT2Q9HBZ2 717 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 TAAR2Q9P1P5 351 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 VPS18Q9P253 973 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 FKBPLQ9UIM3 349 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 APPL1Q9UKG1 709 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 SNX12Q9UMY4 172 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC00963-219ENST00000624390 U3KQA8 63 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 SHROOM3Q8TF72 1996 aa8.28□□□□□ -1.08
LINC00963-219ENST00000624390 GOLGA6L10A0A0M3HER8 536 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 EME2A4GXA9 379 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 ERI2A8K979 691 aaKnown RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 RHPN2P1A8MT19 583 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 CCL22O00626 93 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 GPR39O43194 453 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 NUAK1O60285 661 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 OPA1O60313 960 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 DNAJC6O75061 913 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 SRP72O76094 671 aaKnown RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 DKK1O94907 266 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 PRAMEF1O95521 474 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 MT-CO3P00414 261 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 KRT14P02533 472 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 MSH3P20585 1137 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 AKT1P31749 480 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 COILP38432 576 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 HADHAP40939 763 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 GRIA1P42261 906 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 PPM1FP49593 454 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 SHC2P98077 582 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 CDH17Q12864 832 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 TMEM115Q12893 351 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 TARDBPQ13148 414 aaKnown RBP eCLIP8.27□□□□□ -1.091e-9■■■■■ 30
LINC00963-219ENST00000624390 ITGA9Q13797 1035 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 LRP8Q14114 963 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 SMAD1Q15797 465 aaKnown RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 PLA2G4EQ3MJ16 856 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 CCDC38Q502W7 563 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 ZRANB3Q5FWF4 1079 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 PERM1Q5SV97 790 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 LDLRAP1Q5SW96 308 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 CERCAMQ5T4B2 595 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 HES3Q5TGS1 186 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 TTC27Q6P3X3 843 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 OGFOD3Q6PK18 319 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 C4orf22Q6V702 233 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 TAS2R42Q7RTR8 314 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 TMPRSS12Q86WS5 348 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 SFTPA2Q8IWL1 248 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 KLHDC8BQ8IXV7 354 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 C17orf53Q8N3J3 647 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 ACTRT1Q8TDG2 376 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 NAT6Q93015 286 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 CCDC74AQ96AQ1 378 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 SCARF2Q96GP6 870 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 DNAJC1Q96KC8 554 aaKnown RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 VPS35Q96QK1 796 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 NAPGQ99747 312 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 CCDC3Q9BQI4 270 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 OSGEPL1Q9H4B0 414 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 RMI1Q9H9A7 625 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 KLC4Q9NSK0 619 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 LRIT1Q9P2V4 623 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 NFKBIL1Q9UBC1 381 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 CRLS1Q9UJA2 301 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 TMPRSS11EQ9UL52 423 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 TTC7AQ9ULT0 858 aaPredicted RBP8.27□□□□□ -1.09
LINC00963-219ENST00000624390 KCNK6Q9Y257 313 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 DNAJC16Q9Y2G8 782 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 MSRB2Q9Y3D2 182 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 NEUROG3Q9Y4Z2 214 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 SLC30A1Q9Y6M5 507 aa8.27□□□□□ -1.09
LINC00963-219ENST00000624390 DOCK9Q9BZ29 2069 aa8.26□□□□□ -1.09
LINC00963-219ENST00000624390 CTAGE9A4FU28 777 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms