RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 FTCDO95954 541 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 PTMAP06454 111 aaKnown RBP12.32□□□□□ -0.44
LINC00963-217ENST00000624009 STIP1P31948 543 aaKnown RBP12.32□□□□□ -0.44
LINC00963-217ENST00000624009 ACTR1BP42025 376 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 POLD2P49005 469 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 CLDN6P56747 220 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 ACTR1AP61163 376 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 ITGA9Q13797 1035 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 P3H1Q32P28 736 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 TBC1D25Q3MII6 688 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 DOK6Q6PKX4 331 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 KDELC2Q7Z4H8 507 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 MARCH9Q86YJ5 346 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 CCNJLQ8IV13 435 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 NAGSQ8N159 534 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 TTC30BQ8N4P2 665 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 IPMKQ8NFU5 416 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 SLC35B2Q8TB61 432 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 PTCD2Q8WV60 388 aaKnown RBP12.32□□□□□ -0.44
LINC00963-217ENST00000624009 FGF11Q92914 225 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 RTP4Q96DX8 246 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 TMEM74Q96NL1 305 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 ALS2CR12Q96Q35 445 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 GFM1Q96RP9 751 aaKnown RBP12.32□□□□□ -0.44
LINC00963-217ENST00000624009 GORASP1Q9BQQ3 440 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 LRRN3Q9H3W5 708 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 SMOXQ9NWM0 555 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 SIRPGQ9P1W8 387 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 LRIT1Q9P2V4 623 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 TMEM98Q9Y2Y6 226 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 PKP3Q9Y446 797 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 GPSM3Q9Y4H4 160 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 SPO11Q9Y5K1 396 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 ENTPD2Q9Y5L3 495 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 ST14Q9Y5Y6 855 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 AK5Q9Y6K8 562 aa12.32□□□□□ -0.44
LINC00963-217ENST00000624009 A0A1W2PQM1 296 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 KLHL33A6NCF5 533 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 ERI2A8K979 691 aaKnown RBP12.31□□□□□ -0.44
LINC00963-217ENST00000624009 B4DGG1 531 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 INPP4BO15327 924 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 GRID2O43424 1007 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 BRINP1O60477 761 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 USP12O75317 370 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 ASMTLO95671 621 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 RPLP0P05388 317 aaKnown RBP12.31□□□□□ -0.44
LINC00963-217ENST00000624009 PIRTP0C851 137 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 AK4P27144 223 aaPredicted RBP12.31□□□□□ -0.44
LINC00963-217ENST00000624009 SPAM1P38567 509 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 PDX1P52945 283 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 TAF1AQ15573 450 aaPredicted RBP12.31□□□□□ -0.44
LINC00963-217ENST00000624009 PARP6Q2NL67 630 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 SEL1L2Q5TEA6 688 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 SLC30A9Q6PML9 568 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 GLT6D1Q7Z4J2 308 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 TRIM74Q86UV6 250 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 SFRP1Q8N474 314 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 ARL14Q8N4G2 192 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 TRIM58Q8NG06 486 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 WDR36Q8NI36 951 aaKnown RBP12.31□□□□□ -0.44
LINC00963-217ENST00000624009 TIMM29Q9BSF4 260 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 ZCCHC2Q9C0B9 1178 aaKnown RBP12.31□□□□□ -0.44
LINC00963-217ENST00000624009 B3GNT4Q9C0J1 378 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 STRADBQ9C0K7 418 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 SARS2Q9NP81 518 aaKnown RBP12.31□□□□□ -0.44
LINC00963-217ENST00000624009 IL26Q9NPH9 171 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 ZNHIT2Q9UHR6 403 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 RABGEF1Q9UJ41 708 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 GUCA1BQ9UMX6 200 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 PACSIN2Q9UNF0 486 aaPredicted RBP12.31□□□□□ -0.44
LINC00963-217ENST00000624009 ZKSCAN5Q9Y2L8 839 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 PCDHB1Q9Y5F3 818 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 OAS3Q9Y6K5 1087 aaKnown RBP12.31□□□□□ -0.44
LINC00963-217ENST00000624009 RNF215Q9Y6U7 377 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 COL6A6A6NMZ7 2263 aa12.31□□□□□ -0.44
LINC00963-217ENST00000624009 KALRNO60229 2985 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 CCDC187A0A096LP49 1063 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 KIR2DS5A0A0G2JLQ3 304 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 A0A0G2JNG1 304 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 A0A0U1RQJ8 604 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 A6NCN8 305 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 PRR19A6NJB7 356 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 C2orf81A6NN90 581 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 RHPN2P1A8MT19 583 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 KIR2DS3K7RE56 304 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 AURKAO14965 403 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 KMOO15229 486 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 PSMD3O43242 534 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 ECEL1O95672 775 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 CPNE6O95741 557 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 ATP1A1P05023 1023 aaKnown RBP12.3□□□□□ -0.44
LINC00963-217ENST00000624009 LPOP22079 712 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-217ENST00000624009 PSMB4P28070 264 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 GABREP78334 506 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 CCL7P80098 99 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 GPLD1P80108 840 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 B4GALNT1Q00973 533 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 ZFP36L1Q07352 338 aaKnown RBP12.3□□□□□ -0.44
LINC00963-217ENST00000624009 MSLNQ13421 630 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-217ENST00000624009 KIR2DS5Q14953 304 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms