RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 OAZ3Q9UMX2 235 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 LOXHD1Q8IVV2 1947 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 MYH2Q9UKX2 1941 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 HTR3EA5X5Y0 456 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 IRF8Q02556 426 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SREBF2Q12772 1141 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 STARD3Q14849 445 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 KCTD19Q17RG1 926 aaPredicted RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 IRAK1BP1Q5VVH5 260 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 METTL7BQ6UX53 244 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SPATA6LQ8N4H0 392 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SEC14L1Q92503 715 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 ERLEC1Q96DZ1 483 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 LGMNQ99538 433 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SLC25A13Q9UJS0 675 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 MYH8P13535 1937 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SLC12A8A0AV02 714 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 AP2A1O95782 977 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 OR1E1P30953 314 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SLC9A5Q14940 896 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 PAOXQ6QHF9 649 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 EPGNQ6UW88 154 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 TRPV3Q8NET8 790 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 EDEM1Q92611 657 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 ZC3H10Q96K80 434 aaKnown RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 FRMD6Q96NE9 622 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 LRRC3Q9BY71 257 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 LIN28AQ9H9Z2 209 aaKnown RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 ACTR3BQ9P1U1 418 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 ATF5Q9Y2D1 282 aaPredicted RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 ERCC6L2Q5T890 1561 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 CXCR6O00574 342 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 HTRA2O43464 458 aaPredicted RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 NDUFB5O43674 189 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 CSDE1O75534 798 aaKnown RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 CKMT2P17540 419 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 GNPDA1P46926 289 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 TMEM62Q0P6H9 643 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 EFEMP1Q12805 493 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 COL9A3Q14050 684 aaPredicted RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 DNAJB7Q7Z6W7 309 aaPredicted RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 CLHC1Q8NHS4 586 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 ZFP28Q8NHY6 868 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 TRNT1Q96Q11 434 aaKnown RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 SLC9A7Q96T83 725 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SLC39A8Q9C0K1 460 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 ADAMTS10Q9H324 1103 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SIX2Q9NPC8 291 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 KAT6AQ92794 2004 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 DIP2BQ9P265 1576 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 H7C4K7 107 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 CHRNB2P17787 502 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SLC6A4P31645 630 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 CD83Q01151 205 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SWI5Q1ZZU3 235 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 FSTL4Q6MZW2 842 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SCIMPQ6UWF3 145 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 JOSD2Q8TAC2 188 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 MND1Q9BWT6 205 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 PCDHAC1Q9H158 963 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 ABCC13Q9NSE7 274 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 UPB1Q9UBR1 384 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 ZNF701M0R085 212 aaPredicted RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 DLDP09622 509 aaKnown RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 DARSP14868 501 aaKnown RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 DNASE1L3Q13609 305 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 SMCO1Q147U7 214 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 OLFML2AQ68BL7 652 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 TIFABQ6ZNK6 161 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 CYP4V2Q6ZWL3 525 aaPredicted RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 XYLT1Q86Y38 959 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 ZDHHC21Q8IVQ6 265 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 GLB1L3Q8NCI6 653 aaPredicted RBP8.86□□□□□ -0.99
VCL-206ENST00000623461 CANT1Q8WVQ1 401 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 LENG9Q96B70 501 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 CPXM1Q96SM3 734 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 CCDC106Q9BWC9 280 aa8.86□□□□□ -0.99
VCL-206ENST00000623461 FUOMA2VDF0 154 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 PMM2O15305 246 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 IL1R1P14778 569 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 BMP7P18075 431 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 AXLP30530 894 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 CD86P42081 329 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 CDH13P55290 713 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 IKBKEQ14164 716 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 GRM3Q14832 879 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 ELMO1Q92556 727 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 TOR3AQ9H497 397 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 FAM124BQ9H5Z6 455 aaPredicted RBP8.85□□□□□ -0.99
VCL-206ENST00000623461 ARPC4-TTLL3A0A0A6YYG9 625 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 FAM234BA2RU67 622 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 MEIS2O14770 477 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 ATXN8OSP0DMR3 200 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 NTSP30990 170 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 MATKP42679 507 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 LCP2Q13094 533 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 RAB39AQ14964 217 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 ANKRD13BQ86YJ7 626 aa8.85□□□□□ -0.99
VCL-206ENST00000623461 ACER1Q8TDN7 264 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms