RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 NFKBIAP25963 317 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 GARSP41250 739 aaKnown RBP16.54■□□□□ 0.24
TARDBP-225ENST00000621715 LEPRP48357 1165 aaKnown RBP16.54■□□□□ 0.24
TARDBP-225ENST00000621715 SPINT3P49223 89 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 MLLT10P55197 1068 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 KDELC2Q7Z4H8 507 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 BBS5Q8N3I7 341 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 LPCAT1Q8NF37 534 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 ANKRD20A12PQ8NF67 263 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 FAM71BQ8TC56 605 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 PLEKHG4BQ96PX9 1271 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 POLR1EQ9GZS1 481 aaKnown RBP16.54■□□□□ 0.24
TARDBP-225ENST00000621715 CROTQ9UKG9 612 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 SCINQ9Y6U3 715 aa16.54■□□□□ 0.24
TARDBP-225ENST00000621715 RP1L1Q8IWN7 2480 aaPredicted RBP16.54■□□□□ 0.24
TARDBP-225ENST00000621715 MED13Q9UHV7 2174 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 KIF1CO43896 1103 aaKnown RBP16.53■□□□□ 0.24
TARDBP-225ENST00000621715 C9P02748 559 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 TYRP1P17643 537 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 TCN2P20062 427 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 EPHB1P54762 984 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 EPHA4P54764 986 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 STX1AQ16623 288 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 QPCTQ16769 361 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 PPP1R2P3Q6NXS1 205 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 CLEC17AQ6ZS10 378 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 LYSMD3Q7Z3D4 306 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 GALNT6Q8NCL4 622 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 NSMCE1Q8WV22 266 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 TEKT4Q8WW24 435 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 C9orf72Q96LT7 481 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 LYSMD1Q96S90 227 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 ZPBPQ9BS86 351 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 ULBP3Q9BZM4 244 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 THAP2Q9H0W7 228 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 ANO10Q9NW15 660 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 RBM22Q9NW64 420 aaKnown RBP eCLIP16.53■□□□□ 0.242e-7■■■■■ 31.6
TARDBP-225ENST00000621715 ZNF624Q9P2J8 865 aaPredicted RBP16.53■□□□□ 0.24
TARDBP-225ENST00000621715 TTLL3Q9Y4R7 772 aa16.53■□□□□ 0.24
TARDBP-225ENST00000621715 C1orf232A0A0U1RR37 186 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 BLACEA4D250 179 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 GRID2O43424 1007 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 NUAK1O60285 661 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 ANKRD34CP0C6C1 535 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 SERPINB6P35237 376 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 DLSTP36957 453 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 UQCRFS1P47985 274 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 CD97P48960 835 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 SEPHS1P49903 392 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 FOXM1Q08050 763 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 SLC10A2Q12908 348 aaPredicted RBP16.52■□□□□ 0.24
TARDBP-225ENST00000621715 DPYSL3Q14195 570 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 ERV3-1Q14264 604 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 PLA2G4EQ3MJ16 856 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 KHDC1Q4VXA5 237 aaKnown RBP16.52■□□□□ 0.24
TARDBP-225ENST00000621715 SLC9B2Q86UD5 537 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 FAM26EQ8N5C1 309 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 NIPA2Q8N8Q9 360 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 ELMO2Q96JJ3 720 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 NAP1L5Q96NT1 182 aaPredicted RBP16.52■□□□□ 0.24
TARDBP-225ENST00000621715 RUFY1Q96T51 708 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 HERPUD2Q9BSE4 406 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 PCDH9Q9HC56 1237 aa16.52■□□□□ 0.24
TARDBP-225ENST00000621715 SHANK1Q9Y566 2161 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 ITPR2Q14571 2701 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 KIR2DS5A0A0G2JLQ3 304 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 A0A0G2JNG1 304 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 LILRA5A6NI73 299 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 KIR2DS3K7RE56 304 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 MATN3O15232 486 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 DNAJB5O75953 348 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 TIAF1O95411 115 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 PYGLP06737 847 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 KRT7P08729 469 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 BRAFP15056 766 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 SLC19A1P41440 591 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 PPP1CAP62136 330 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 GBE1Q04446 702 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 KLHL30Q0D2K2 578 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 MAP7Q14244 749 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 KIR2DS5Q14953 304 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 PAFAH1B3Q15102 231 aaKnown RBP16.51■□□□□ 0.23
TARDBP-225ENST00000621715 CRTC2Q53ET0 693 aaPredicted RBP16.51■□□□□ 0.23
TARDBP-225ENST00000621715 HGSNATQ68CP4 663 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 CRTC3Q6UUV7 619 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 SASS6Q6UVJ0 657 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 ESX1Q8N693 406 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 RSC1A1Q92681 617 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 TGM7Q96PF1 710 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 OR2AG1Q9H205 316 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 FAM83DQ9H4H8 585 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 AKIRIN1Q9H9L7 192 aaPredicted RBP16.51■□□□□ 0.23
TARDBP-225ENST00000621715 MRPL47Q9HD33 250 aaKnown RBP16.51■□□□□ 0.23
TARDBP-225ENST00000621715 KLC4Q9NSK0 619 aa16.51■□□□□ 0.23
TARDBP-225ENST00000621715 KIAA0754O94854 1291 aa16.5■□□□□ 0.23
TARDBP-225ENST00000621715 PIRTP0C851 137 aa16.5■□□□□ 0.23
TARDBP-225ENST00000621715 RNF224P0DH78 156 aa16.5■□□□□ 0.23
TARDBP-225ENST00000621715 MYBL1P10243 752 aa16.5■□□□□ 0.23
TARDBP-225ENST00000621715 ZNF165P49910 485 aa16.5■□□□□ 0.23
TARDBP-225ENST00000621715 KLRB1Q12918 225 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms