RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 CTDNEP1O95476 244 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 IL1AP01583 271 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 DAOP14920 347 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 FAM27E3Q08E93 113 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 LPIN1Q14693 890 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 TNIP1Q15025 636 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 STK38Q15208 465 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 SF3B4Q15427 424 aaKnown RBP eCLIP5.12□□□□□ -1.592e-7■■■■□ 25.8
VPS29-212ENST00000621131 ZRSR1Q15695 479 aaKnown RBP5.12□□□□□ -1.59
VPS29-212ENST00000621131 FBXO43Q4G163 708 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 FAM83BQ5T0W9 1011 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 SPICE1Q8N0Z3 855 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 ENAHQ8N8S7 591 aaPredicted RBP5.12□□□□□ -1.59
VPS29-212ENST00000621131 CCDC148Q8NFR7 591 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 KCNG4Q8TDN1 519 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 CCDC12Q8WUD4 166 aaPredicted RBP5.12□□□□□ -1.59
VPS29-212ENST00000621131 IGSF21Q96ID5 467 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 TXNDC15Q96J42 360 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 CHODLQ9H9P2 273 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 SAYSD1Q9NPB0 183 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 STX8Q9UNK0 236 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 MYH6P13533 1939 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 PLIN4Q96Q06 1357 aa5.12□□□□□ -1.59
VPS29-212ENST00000621131 COL2A1P02458 1487 aaPredicted RBP5.12□□□□□ -1.59
VPS29-212ENST00000621131 IGLV5-37A0A075B6J1 123 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 MPHOSPH10O00566 681 aaKnown RBP5.11□□□□□ -1.59
VPS29-212ENST00000621131 ENTPD3O75355 529 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 YEATS4O95619 227 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 TOP1P11387 765 aaKnown RBP5.11□□□□□ -1.59
VPS29-212ENST00000621131 RXRAP19793 462 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 CALML3P27482 149 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 KRT2P35908 639 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 CENPAP49450 140 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 RHBDL3P58872 404 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 SLC18A2Q05940 514 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 MORC3Q14149 939 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 TUBB8Q3ZCM7 444 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 CBWD5Q5RIA9 395 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 NAPEPLDQ6IQ20 393 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 RETSATQ6NUM9 610 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 CDC42EP5Q6NZY7 148 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 GSG1LQ6UXU4 331 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 TMTC3Q6ZXV5 915 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 MUC20Q8N307 709 aaPredicted RBP5.11□□□□□ -1.59
VPS29-212ENST00000621131 RFLNBQ8N5W9 214 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 ZNF713Q8N859 430 aaPredicted RBP5.11□□□□□ -1.59
VPS29-212ENST00000621131 AGBL3Q8NEM8 1001 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 ZMIZ2Q8NF64 920 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 CCDC34Q96HJ3 373 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 TAOK3Q9H2K8 898 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 TSPY26PQ9H489 355 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 DDX19AQ9NUU7 478 aaKnown RBP5.11□□□□□ -1.59
VPS29-212ENST00000621131 SEC63Q9UGP8 760 aaKnown RBP5.11□□□□□ -1.59
VPS29-212ENST00000621131 ADAMTSL1Q8N6G6 1762 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 WDR81Q562E7 1941 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 PIEZO1Q92508 2521 aa5.11□□□□□ -1.59
VPS29-212ENST00000621131 J3KR12 359 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 ZNF646O15015 1829 aaPredicted RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 CTAGE5O15320 804 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 KINO60870 393 aaKnown RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 PLGP00747 810 aaPredicted RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 SERPINC1P01008 464 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 MMP1P03956 469 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 TNNT1P13805 278 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 FDPSP14324 419 aaKnown RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 CTPS1P17812 591 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 RPS12P25398 132 aaKnown RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 HNF1BP35680 557 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 CENPFP49454 3210 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 AARSP49588 968 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS29-212ENST00000621131 MUC3AQ02505 3323 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 MAP2K1Q02750 393 aaPredicted RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 MYBPHQ13203 477 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 TNFAIP1Q13829 316 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 ZSCAN23Q3MJ62 389 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 ASPRV1Q53RT3 343 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 DCAF6Q58WW2 860 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 RILPL1Q5EBL4 403 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 TYW3Q6IPR3 259 aaKnown RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 GALNT17Q6IS24 598 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 FOXP4Q8IVH2 680 aaPredicted RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 PGBD5Q8N414 524 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 CERS5Q8N5B7 392 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 RASSF8Q8NHQ8 419 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 SNED1Q8TER0 1413 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 RUBCNQ92622 972 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 RRP36Q96EU6 259 aaKnown RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 RNFT2Q96EX2 444 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 DYNLL2Q96FJ2 89 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 PASKQ96RG2 1323 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 MXD3Q9BW11 206 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 NPLQ9BXD5 320 aaPredicted RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 IDI2Q9BXS1 227 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 SH3GLB2Q9NR46 395 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 TMEM51Q9NW97 253 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 TAGLN3Q9UI15 199 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 HOOK1Q9UJC3 728 aaKnown RBP5.1□□□□□ -1.59
VPS29-212ENST00000621131 CASP8AP2Q9UKL3 1982 aa5.1□□□□□ -1.59
VPS29-212ENST00000621131 FER1L6Q2WGJ9 1857 aa5.09□□□□□ -1.59
VPS29-212ENST00000621131 PSMD14O00487 310 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms