RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 H7C0C1 242 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 hCG_2039718K7EN88 272 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CLOCKO15516 846 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 LRRTM2O43300 516 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 LPXNO60711 386 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 PPP6R2O75170 966 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 GMNNO75496 209 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 METTL18O95568 372 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 FGBP02675 491 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 TUBBP07437 444 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 TCF4P15884 667 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 NFKB1P19838 968 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 PRPS1L1P21108 318 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 PSMB6P28072 239 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 RYKP34925 604 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 FEN1P39748 380 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 GNG2P59768 71 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 TUBB4BP68371 445 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 RAD51Q06609 339 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CDH17Q12864 832 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 TRAF2Q12933 501 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 SRSF5Q13243 272 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CLCA4Q14CN2 919 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CNN3Q15417 329 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 SEC23AQ15436 765 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 TBCCQ15814 346 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 TMEM44Q2T9K0 475 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 BBS12Q6ZW61 710 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 C1orf186Q6ZWK4 172 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 NAGSQ8N159 534 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 C17orf53Q8N3J3 647 aaPredicted RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 MINDY1Q8N5J2 469 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 ALLCQ8N6M5 410 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 OR5T1Q8NG75 326 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 HAUS1Q96CS2 278 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 PDXPQ96GD0 296 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CLIC6Q96NY7 704 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CDK15Q96Q40 435 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 TAAR6Q96RI8 345 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 INTS14Q96SY0 518 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 NAPBQ9H115 298 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 UPF3AQ9H1J1 476 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 BRF2Q9HAW0 419 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 IL21Q9HBE4 155 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 ATP13A2Q9NQ11 1180 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 C11orf16Q9NQ32 467 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 DNAJC11Q9NVH1 559 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 SMARCAL1Q9NZC9 954 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CLEC2DQ9UHP7 191 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 PSAT1Q9Y617 370 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 TEX264Q9Y6I9 313 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CACNA1SQ13698 1873 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 GSTTP1A0A1W2PQM5 241 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 HMX3A6NHT5 357 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 PCP4L1A6NKN8 68 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 RHPN2P1A8MT19 583 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 C2orf74A8MZ97 194 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 C22orf46C9J442 243 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 ANKRD65E5RJM6 399 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 SRGAP3O43295 1099 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 GPR32O75388 356 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 KRT16P08779 473 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 MYF5P13349 255 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 FDPSP14324 419 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 SP100P23497 879 aaPredicted RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 EIF2DP41214 584 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 ACTBP60709 375 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 ACTR3P61158 418 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 ACTA2P62736 377 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 ACTG1P63261 375 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 ACTG2P63267 376 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 ACTC1P68032 377 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 ACTA1P68133 377 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CREMQ03060 361 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 PEX6Q13608 980 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 GAB4Q2WGN9 574 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 PIP5KL1Q5T9C9 394 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CDC73Q6P1J9 531 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 NPNTQ6UXI9 565 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 TOM1L2Q6ZVM7 507 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 TRILQ7L0X0 811 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CXXC5Q7LFL8 322 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 C2CD5Q86YS7 1000 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 SLC13A5Q86YT5 568 aaPredicted RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 MISPQ8IVT2 679 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 RCOR2Q8IZ40 523 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 FAM181AQ8N9Y4 354 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 C12orf50Q8NA57 414 aaPredicted RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 NOA1Q8NC60 698 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 SLC7A14Q8TBB6 771 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 PLEKHO2Q8TD55 490 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 DTD1Q8TEA8 209 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 CHURC1Q8WUH1 139 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 DACT3Q96B18 629 aaPredicted RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 C18orf8Q96DM3 657 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 MTFMTQ96DP5 389 aaKnown RBP4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 C9orf72Q96LT7 481 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 GDF15Q99988 308 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 RTKNQ9BST9 563 aa4.06□□□□□ -1.76
UBE2D3-233ENST00000618836 DUSP26Q9BV47 211 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms