RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 FAF2Q96CS3 445 aa24.66■■□□□ 1.54
PTPRF-216ENST00000617451 MLPHQ9BV36 600 aaPredicted RBP24.66■■□□□ 1.54
PTPRF-216ENST00000617451 GPN2Q9H9Y4 310 aaPredicted RBP24.66■■□□□ 1.54
PTPRF-216ENST00000617451 PKD2L2Q9NZM6 624 aa24.66■■□□□ 1.54
PTPRF-216ENST00000617451 RELNP78509 3460 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 KIR2DS5A0A0G2JLQ3 304 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 A0A0G2JNG1 304 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 ANKRD66B4E2M5 251 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 KIR2DS3K7RE56 304 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 NKX2-8O15522 239 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 NUAK1O60285 661 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 SNX2O60749 519 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 MMP2P08253 660 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 F3P13726 295 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 MX2P20592 715 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 MAN1A1P33908 653 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 GJC1P36383 396 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 SLC10A2Q12908 348 aaPredicted RBP24.65■■□□□ 1.54
PTPRF-216ENST00000617451 KIR2DS5Q14953 304 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 NFKBIBQ15653 356 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 TIPARPQ7Z3E1 657 aaKnown RBP24.65■■□□□ 1.54
PTPRF-216ENST00000617451 PTRH1Q86Y79 214 aaKnown RBP24.65■■□□□ 1.54
PTPRF-216ENST00000617451 MAP7D3Q8IWC1 876 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 PQLC3Q8N755 202 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 CCHCR1Q8TD31 782 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.65■■□□□ 1.54
PTPRF-216ENST00000617451 CARD9Q9H257 536 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 EPB41L1Q9H4G0 881 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 APMAPQ9HDC9 416 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 CPNE7Q9UBL6 633 aa24.65■■□□□ 1.54
PTPRF-216ENST00000617451 TMEM184BQ9Y519 407 aaPredicted RBP24.65■■□□□ 1.54
PTPRF-216ENST00000617451 LOC101059948A0A1B0GTJ6 334 aa24.64■■□□□ 1.54
PTPRF-216ENST00000617451 OR5K4A6NMS3 321 aa24.64■■□□□ 1.54
PTPRF-216ENST00000617451 GRID2O43424 1007 aa24.64■■□□□ 1.54
PTPRF-216ENST00000617451 CD86P42081 329 aa24.64■■□□□ 1.54
PTPRF-216ENST00000617451 ZBED6P86452 979 aa24.64■■□□□ 1.54
PTPRF-216ENST00000617451 KIAA1143Q96AT1 154 aaPredicted RBP24.64■■□□□ 1.54
PTPRF-216ENST00000617451 HDAC11Q96DB2 347 aa24.64■■□□□ 1.54
PTPRF-216ENST00000617451 EFHD1Q9BUP0 239 aa24.64■■□□□ 1.54
PTPRF-216ENST00000617451 TBC1D10AQ9BXI6 508 aa24.64■■□□□ 1.54
PTPRF-216ENST00000617451 ATXN10Q9UBB4 475 aa24.64■■□□□ 1.54
PTPRF-216ENST00000617451 NBASA2RRP1 2371 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 STK17BO94768 372 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 PROSCO94903 275 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 JCHAINP01591 159 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 MAPK9P45984 424 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 CLCNKAP51800 687 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 TAS2R40P59535 323 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 ABHD18Q0P651 414 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 CCDC13Q8IYE1 715 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 UNC5BQ8IZJ1 945 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 AVL9Q8NBF6 648 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 CCNYQ8ND76 341 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 EID2BQ96D98 161 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 ADGRE3Q9BY15 652 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 TRIT1Q9H3H1 467 aaKnown RBP24.63■■□□□ 1.53
PTPRF-216ENST00000617451 PRDM8Q9NQV8 689 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 DTLQ9NZJ0 730 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 KLHL3Q9UH77 587 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 CAPN11Q9UMQ6 739 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 ADGRG1Q9Y653 693 aa24.63■■□□□ 1.53
PTPRF-216ENST00000617451 ZNF8P17098 575 aaPredicted RBP24.62■■□□□ 1.53
PTPRF-216ENST00000617451 UBE2IP63279 158 aaKnown RBP24.62■■□□□ 1.53
PTPRF-216ENST00000617451 FANCCQ00597 558 aa24.62■■□□□ 1.53
PTPRF-216ENST00000617451 PHYKPLQ8IUZ5 450 aa24.62■■□□□ 1.53
PTPRF-216ENST00000617451 CNTD1Q8N815 330 aa24.62■■□□□ 1.53
PTPRF-216ENST00000617451 CPLX3Q8WVH0 158 aa24.62■■□□□ 1.53
PTPRF-216ENST00000617451 NENFQ9UMX5 172 aa24.62■■□□□ 1.53
PTPRF-216ENST00000617451 MN1Q10571 1320 aaPredicted RBP24.61■■□□□ 1.53
PTPRF-216ENST00000617451 LILRA5A6NI73 299 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 KCNK1O00180 336 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 POLR1CO15160 346 aaPredicted RBP24.61■■□□□ 1.53
PTPRF-216ENST00000617451 KRT7P08729 469 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 ANKRD34CP0C6C1 535 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 PRKAR1AP10644 381 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 CDC20Q12834 499 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 PLXDC1Q8IUK5 500 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 PLEKHG4BQ96PX9 1271 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 OR2AG1Q9H205 316 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 UCK1Q9HA47 277 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 ARFGAP3Q9NP61 516 aa24.61■■□□□ 1.53
PTPRF-216ENST00000617451 SIDT1Q9NXL6 827 aaKnown RBP24.61■■□□□ 1.53
PTPRF-216ENST00000617451 DLGAP3O95886 979 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 IFI35P80217 286 aaPredicted RBP24.6■■□□□ 1.53
PTPRF-216ENST00000617451 PPIDQ08752 370 aaKnown RBP24.6■■□□□ 1.53
PTPRF-216ENST00000617451 GALNT3Q14435 633 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 SKIDA1Q1XH10 827 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 COLEC12Q5KU26 742 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 ZNF648Q5T619 568 aaPredicted RBP24.6■■□□□ 1.53
PTPRF-216ENST00000617451 KDELC2Q7Z4H8 507 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 IQCDQ96DY2 449 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 TRIB3Q96RU7 358 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 SPATA16Q9BXB7 569 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 EPN3Q9H201 632 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 ZFYVE1Q9HBF4 777 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 TRIM39Q9HCM9 518 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 KLC4Q9NSK0 619 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 OGFRQ9NZT2 677 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 CTTNBP2NLQ9P2B4 639 aa24.6■■□□□ 1.53
PTPRF-216ENST00000617451 UVRAGQ9P2Y5 699 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms