RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 XRCC1P18887 633 aaPredicted RBP10.31□□□□□ -0.76
LINC00598-207ENST00000616706 CDKN1CP49918 316 aaPredicted RBP10.31□□□□□ -0.76
LINC00598-207ENST00000616706 PKNOX1P55347 436 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 MRPS35P82673 323 aaKnown RBP10.31□□□□□ -0.76
LINC00598-207ENST00000616706 PTK2BQ14289 1009 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 RFTN1Q14699 578 aaPredicted RBP10.31□□□□□ -0.76
LINC00598-207ENST00000616706 TAF1AQ15573 450 aaPredicted RBP10.31□□□□□ -0.76
LINC00598-207ENST00000616706 LPCAT4Q643R3 524 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 ANKRD54Q6NXT1 300 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 SYCE2Q6PIF2 218 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 AFAP1L2Q8N4X5 818 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 PTGR2Q8N8N7 351 aaPredicted RBP10.31□□□□□ -0.76
LINC00598-207ENST00000616706 ST13P5Q8NFI4 369 aaPredicted RBP10.31□□□□□ -0.76
LINC00598-207ENST00000616706 LPGAT1Q92604 370 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 USP13Q92995 863 aaPredicted RBP10.31□□□□□ -0.76
LINC00598-207ENST00000616706 TDP1Q9NUW8 608 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 INTS10Q9NVR2 710 aaKnown RBP10.31□□□□□ -0.76
LINC00598-207ENST00000616706 LSM7Q9UK45 103 aaKnown RBP10.31□□□□□ -0.76
LINC00598-207ENST00000616706 IKZF3Q9UKT9 509 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 TBC1D30Q9Y2I9 924 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 PCDHGC4Q9Y5F7 938 aa10.31□□□□□ -0.76
LINC00598-207ENST00000616706 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PPP6CO00743 305 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 CFLARO15519 480 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 GREM1O60565 184 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 SMIM24O75264 130 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 POU2F2P09086 479 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 FSHRP23945 695 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PEX2P28328 305 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PMLP29590 882 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 CDH13P55290 713 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 DLX2Q07687 328 aaPredicted RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 ZNF177Q13360 481 aaPredicted RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PDAP1Q13442 181 aaKnown RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 ADAM15Q13444 863 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 ADGRE1Q14246 886 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 SQLEQ14534 574 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PTPRRQ15256 657 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 UGT3A2Q3SY77 523 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 RNF219Q5W0B1 726 aaPredicted RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 AFTPHQ6ULP2 937 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 TMEM184AQ6ZMB5 413 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 GPR149Q86SP6 731 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 SDCCAG8Q86SQ7 713 aaPredicted RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 BBS7Q8IWZ6 715 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 RNF148Q8N7C7 305 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 SNX31Q8N9S9 440 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 LPCAT1Q8NF37 534 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 BHMTQ93088 406 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 C3orf30Q96M34 536 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 SERPINI1Q99574 410 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 TRMOQ9BU70 441 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 EFCAB1Q9HAE3 211 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 CLDND1Q9NY35 253 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 MTCH2Q9Y6C9 303 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 ATG2AQ2TAZ0 1938 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 NOTCH4Q99466 2003 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 A0A1W2PPC1 479 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 DPPA5A6NC42 116 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 SOX1O00570 391 aaPredicted RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 FBP2O00757 339 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 UBDO15205 165 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 SNAP91O60641 907 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PRAMEF12O95522 483 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 MT-CO1P00395 513 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PFKLP17858 780 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PSMA3P25788 255 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 FMO4P31512 558 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 MSX2P35548 267 aaPredicted RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 SH3BP2P78314 561 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 MS4A2Q01362 244 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 ILF2Q12905 390 aaKnown RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 TRAF2Q12933 501 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 FASTKQ14296 549 aaKnown RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 LRRC36Q1X8D7 754 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 SFT2D3Q587I9 215 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PSAPL1Q6NUJ1 521 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PAQR3Q6TCH7 311 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 LINGO4Q6UY18 593 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 HTR3DQ70Z44 454 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 LARP4Q71RC2 724 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 GET4Q7L5D6 327 aaPredicted RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 PDSS2Q86YH6 399 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 RHEBL1Q8TAI7 183 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 TMA16Q96EY4 203 aaKnown RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 LRCH3Q96II8 777 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 NSUN5Q96P11 429 aaKnown RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 DDX50Q9BQ39 737 aaKnown RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 MUC3BQ9H195 1237 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 TFB2MQ9H5Q4 396 aaKnown RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 LMCD1Q9NZU5 365 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 CLEC1BQ9P126 229 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 GALPQ9UBC7 116 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 FAM50BQ9Y247 325 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 ARIH1Q9Y4X5 557 aaPredicted RBP10.3□□□□□ -0.76
LINC00598-207ENST00000616706 RAI2Q9Y5P3 530 aa10.3□□□□□ -0.76
LINC00598-207ENST00000616706 MYOFQ9NZM1 2061 aa10.29□□□□□ -0.76
LINC00598-207ENST00000616706 A0A0U1RQS6 177 aa10.29□□□□□ -0.76
LINC00598-207ENST00000616706 ATP6AP2A0A1C7CYW4 349 aa10.29□□□□□ -0.76
LINC00598-207ENST00000616706 CASQ2O14958 399 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms