RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 NUAK1O60285 661 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 SNX2O60749 519 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 H2AFZP0C0S5 128 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 F3P13726 295 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 KDELR1P24390 212 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 PPIDQ08752 370 aaKnown RBP20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 ZFYVE27Q5T4F4 411 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 H2AFVQ71UI9 128 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 LYSMD3Q7Z3D4 306 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 SLC9B2Q86UD5 537 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 PLD5Q8N7P1 536 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 CTNNBL1Q8WYA6 563 aaPredicted RBP20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 NCSTNQ92542 709 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 RTP4Q96DX8 246 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 ZNF830Q96NB3 372 aaPredicted RBP20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 RNF157Q96PX1 679 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 CTRCQ99895 268 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 HERPUD2Q9BSE4 406 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 CARD9Q9H257 536 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 ARFGAP3Q9NP61 516 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 GEMIN8Q9NWZ8 242 aaKnown RBP20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 IFNKQ9P0W0 207 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 ATXN10Q9UBB4 475 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 PILRAQ9UKJ1 303 aa20.55■□□□□ 0.88
TRAPPC3-208ENST00000616074 GRID2O43424 1007 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 SUV39H1O43463 412 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 PPFIA2O75334 1257 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 MAN1A1P33908 653 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 MAPK9P45984 424 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 EPHA4P54764 986 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 IFI35P80217 286 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 MC2RQ01718 297 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 ZNF648Q5T619 568 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 BORAQ6PGQ7 559 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 SH3KBP1Q96B97 665 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 TEFMQ96QE5 360 aaKnown RBP20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 ADGRE3Q9BY15 652 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 CEP41Q9BYV8 373 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 SLC25A18Q9H1K4 315 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 ADGRG1Q9Y653 693 aa20.54■□□□□ 0.88
TRAPPC3-208ENST00000616074 SLC2A4P14672 509 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 ZNF8P17098 575 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 HNRNPH3P31942 346 aaKnown RBP20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 CSRP3P50461 194 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 SLC18A3Q16572 532 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 ALS2CLQ60I27 953 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 ATG14Q6ZNE5 492 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 TRIB3Q96RU7 358 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 SPATA16Q9BXB7 569 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 TBC1D10AQ9BXI6 508 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 SPRY4Q9C004 299 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 BRD8Q9H0E9 1235 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 OR2AG1Q9H205 316 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 ZFYVE1Q9HBF4 777 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 APMAPQ9HDC9 416 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 PRDM8Q9NQV8 689 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 CPNE7Q9UBL6 633 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 KLHL3Q9UH77 587 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 IL17BQ9UHF5 180 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 LCMT1Q9UIC8 334 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 HEY1Q9Y5J3 304 aa20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 ZNF106Q9H2Y7 1883 aaKnown RBP20.53■□□□□ 0.88
TRAPPC3-208ENST00000616074 KIR2DS5A0A0G2JLQ3 304 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 A0A0G2JNG1 304 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 LRRD1A4D1F6 860 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 GOLGA6L19H0YKK7 550 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 KIR2DS3K7RE56 304 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 PIRTP0C851 137 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 MESDQ14696 234 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 KIR2DS5Q14953 304 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 ZNF569Q5MCW4 686 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 CEACAM20Q6UY09 585 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 KDELC2Q7Z4H8 507 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 PHYKPLQ8IUZ5 450 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 NLGN4XQ8N0W4 816 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 GPR26Q8NDV2 337 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 NLGN4YQ8NFZ3 816 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 KLC4Q9NSK0 619 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 SHOC2Q9UQ13 582 aa20.52■□□□□ 0.88
TRAPPC3-208ENST00000616074 HECTD1Q9ULT8 2610 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 OR5K4A6NMS3 321 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 ZNF891A8MT65 544 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 SLC25A14O95258 325 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 SLC4A1P02730 911 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 CLCNKAP51800 687 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 POLE2P56282 527 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 UBE2IP63279 158 aaKnown RBP20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 AP1B1Q10567 949 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 ASTE1Q2TB18 679 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 SLC9A4Q6AI14 798 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 TIPARPQ7Z3E1 657 aaKnown RBP20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 IMP4Q96G21 291 aaKnown RBP20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 PLEKHG4BQ96PX9 1271 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 ADNPQ9H2P0 1102 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 OSGEPL1Q9H4B0 414 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 FBXO8Q9NRD0 319 aa20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 SCHIP1Q9P0W5 487 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC3-208ENST00000616074 LOC101059948A0A1B0GTJ6 334 aa20.5■□□□□ 0.87
TRAPPC3-208ENST00000616074 LILRA5A6NI73 299 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms