RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 FIZ1Q96SL8 496 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 SLC25A33Q9BSK2 321 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 SPXQ9BT56 116 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 MMTAG2Q9BU76 263 aaKnown RBP2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 THUMPD3Q9BV44 507 aaKnown RBP2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 UTP14AQ9BVJ6 771 aaKnown RBP2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 KRT23Q9C075 422 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 MMADHCQ9H3L0 296 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 SMARCAD1Q9H4L7 1026 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 ENTPD7Q9NQZ7 604 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 SNTG1Q9NSN8 517 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 SEPT11Q9NVA2 429 aaKnown RBP2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 AATFQ9NY61 560 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 MRPL15Q9P015 296 aaKnown RBP2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 AKAP7Q9P0M2 348 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 EXTL2Q9UBQ6 330 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 ZMAT5Q9UDW3 170 aaKnown RBP2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 SUN2Q9UH99 717 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 CD207Q9UJ71 328 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 CNPY2Q9Y2B0 182 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 KLHL20Q9Y2M5 609 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 DERAQ9Y315 318 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 C2CD2Q9Y426 696 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 FAM169AQ9Y6X4 670 aa2.66□□□□□ -1.98
HMGB1P24-202ENST00000615653 A0A0B4J203 849 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 PLSCR5A0PG75 271 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CTAGE9A4FU28 777 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 DDTLA6NHG4 134 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 HNRNPCL2B2RXH8 293 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 FAM157AC9JC47 383 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 AP3B1O00203 1094 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CACNB4O00305 520 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 UBE2CO00762 179 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 TSPAN4O14817 238 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CEP104O60308 925 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 HNRNPCL1O60812 293 aaKnown RBP2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 SOCS5O75159 536 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 GUCY1B2O75343 617 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 E2F6O75461 281 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 BBOX1O75936 387 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 KRT38O76015 456 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CSPG5O95196 566 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CBX6O95503 412 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 PPP1R3DO95685 299 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 IL1AP01583 271 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CLEC3BP05452 202 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 LAMP2P13473 410 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 ABCD3P28288 659 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 STIP1P31948 543 aaKnown RBP2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 DCTDP32321 178 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 PSMC2P35998 433 aaKnown RBP2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 TCF7P36402 384 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 GP5P40197 560 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 ARL1P40616 181 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 AMPHP49418 695 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CENPAP49450 140 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CCR5P51681 352 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 KRTAP10-8P60410 259 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 GMFBP60983 142 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 RPP30P78346 268 aaKnown RBP2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 ECT2LQ008S8 904 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 SCN1BQ07699 218 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 DDR1Q08345 913 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 FAM27E3Q08E93 113 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 GALNT2Q10471 571 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 RALGDSQ12967 914 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CBX3Q13185 183 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 IL13RA2Q14627 380 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 BAK1Q16611 211 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 KIF19Q2TAC6 998 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 DUSP28Q4G0W2 176 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 LRRC24Q50LG9 513 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 BMP2KLQ5H9B9 411 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CBWD5Q5RIA9 395 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CCDC183Q5T5S1 534 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 TMEM154Q6P9G4 183 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 SPSB3Q6PJ21 355 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 DCLRE1AQ6PJP8 1040 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 SLC22A25Q6T423 547 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 FIP1L1Q6UN15 594 aaKnown RBP2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 RGS9BPQ6ZS82 235 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 BBS12Q6ZW61 710 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 LPCAT2Q7L5N7 544 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CHST3Q7LGC8 479 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 PXKQ7Z7A4 578 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 CCDC105Q8IYK2 499 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 AFAP1Q8N556 730 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 TTC39CQ8N584 583 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 ANKRD44Q8N8A2 993 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 SETD9Q8NE22 299 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 MCPH1Q8NEM0 835 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 IPMKQ8NFU5 416 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 OR4N2Q8NGD1 307 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 SCFD2Q8WU76 684 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 ZFAND2BQ8WV99 257 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 TMEM170AQ8WVE7 144 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 KRT35Q92764 455 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 VPS33AQ96AX1 596 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 RNF183Q96D59 192 aa2.65□□□□□ -1.99
HMGB1P24-202ENST00000615653 SIPA1Q96FS4 1042 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms