RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CSPG4P5Q96PW8 444 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 BTBD9Q96Q07 612 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 CORO1BQ9BR76 489 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 NIFKQ9BYG3 293 aaKnown RBP4.55□□□□□ -1.68
CHD9-221ENST00000615216 BPIFA1Q9NP55 256 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 RASSF1Q9NS23 344 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 MIOSQ9NXC5 875 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 UPB1Q9UBR1 384 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 TOPAZ1Q8N9V7 1692 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 ANKRD36CQ5JPF3 1778 aa4.55□□□□□ -1.68
CHD9-221ENST00000615216 FADS2P1A8MWK0 482 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 GSC2O15499 205 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 PAPSS1O43252 624 aaPredicted RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 TRMUO75648 421 aaKnown RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 ZMPSTE24O75844 475 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 SLC25A14O95258 325 aaPredicted RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 NDST3O95803 873 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 HNRNPLP14866 589 aaKnown RBP eCLIP4.54□□□□□ -1.689e-7■■■■□ 22.4
CHD9-221ENST00000615216 LCP2Q13094 533 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 TEAD4Q15561 434 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 SULT1C3Q6IMI6 304 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CRTC3Q6UUV7 619 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 ZNF572Q7Z3I7 529 aaPredicted RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 CLNKQ7Z7G1 428 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 MPP5Q8N3R9 675 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 SRFBP1Q8NEF9 429 aaKnown RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 P2RY11Q96G91 374 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 ZNF347Q96SE7 839 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 NPAS2Q99743 824 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 INTS10Q9NVR2 710 aaKnown RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 TCAF1Q9Y4C2 921 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 A0A0X1KG70 313 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 ADM5C9JUS6 153 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 DHFRP00374 187 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 NTRK1P04629 796 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 IGFALSP35858 605 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 KIR3DL1P43629 444 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 KHKP50053 298 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 PRKAG1P54619 331 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 HERC3Q15034 1050 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.54□□□□□ -1.68
CHD9-221ENST00000615216 CCNYL2Q5T2Q4 361 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 ATXN7L2Q5T6C5 722 aaPredicted RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 AHI1Q8N157 1196 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 GLB1L3Q8NCI6 653 aaPredicted RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 MCFD2Q8NI22 146 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 PIGXQ8TBF5 258 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 SPPL2BQ8TCT7 592 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 ACOT12Q8WYK0 555 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 RHBGQ9H310 441 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CAB39LQ9H9S4 337 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 MRPS23Q9Y3D9 190 aaKnown RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 XKRYO14609 159 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 SRPRAP08240 638 aaKnown RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 BMP6P22004 513 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CTNNB1P35222 781 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 PTPN9P43378 593 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CYP4F2P78329 520 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 PRR5P85299 388 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CYP4F3Q08477 520 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 MYBPC3Q14896 1274 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 SLC5A9Q2M3M2 681 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 PIK3R6Q5UE93 754 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 ANKRD23Q86SG2 305 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 SPACA7Q96KW9 195 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 FCRL2Q96LA5 508 aaPredicted RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 NOL11Q9H8H0 719 aaKnown RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 ELOVL7A1L3X0 281 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 KERAO60938 352 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 OR5F1O95221 314 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 IL1BP01584 269 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CYP4B1P13584 511 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CCNFP41002 786 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CDH4P55283 916 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 RHBDL3P58872 404 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 PUDPQ08623 228 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CCNIQ14094 377 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 TATDN1Q6P1N9 297 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 FAM131AQ6UXB0 335 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 ABHD15Q6UXT9 468 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 ELMO3Q96BJ8 720 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CENPNQ96H22 339 aaPredicted RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 AGAP2Q99490 1192 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 AARSD1Q9BTE6 412 aaKnown RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 MAGEE1Q9HCI5 957 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 PHPT1Q9NRX4 125 aaPredicted RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 THUMPD1Q9NXG2 353 aaKnown RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 SEC14L3Q9UDX4 400 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 GNEQ9Y223 722 aaKnown RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 ARHGEF33A8MVX0 844 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 LRATO95237 230 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 FADS2O95864 444 aaKnown RBP4.54□□□□□ -1.68
CHD9-221ENST00000615216 MAPK10P53779 464 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 CTBP1Q13363 440 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 TUSC3Q13454 348 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 MED22Q15528 200 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 ZNF697Q5TEC3 545 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 RAB43Q86YS6 212 aa4.54□□□□□ -1.68
CHD9-221ENST00000615216 ZNF354BQ96LW1 612 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms