RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 TLDC2A0PJX2 215 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 C4orf47A7E2U8 309 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 FADS2P1A8MWK0 482 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 H3BQF6 201 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 K7ESM1 405 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 PSMD11O00231 422 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 NEMP1O14524 444 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 CDX4O14627 284 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 RASGRF2O14827 1237 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 RAD51BO15315 384 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 CD3EAPO15446 510 aaKnown RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 TSPAN6O43657 245 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 RNGTTO60942 597 aaKnown RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 SRP72O76094 671 aaKnown RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 PCDH8O95206 1070 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 PRAMEF1O95521 474 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 S1PR4O95977 384 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 ADRB1P08588 477 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 ACADMP11310 421 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 PAMP19021 973 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 ITPKAP23677 461 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 GMPRP36959 345 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 HADHAP40939 763 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 PGGT1BP53609 377 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 DCDC1P59894 354 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 IFFO1Q0D2I5 559 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 LAMB3Q13751 1172 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 THOC5Q13769 683 aaKnown RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 TMED2Q15363 201 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 DBN1Q16643 649 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 TYSND1Q2T9J0 566 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 KRT71Q3SY84 523 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 ATP13A5Q4VNC0 1218 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 KHDC1Q4VXA5 237 aaKnown RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 TMEM259Q4ZIN3 620 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 TTMPQ5BVD1 217 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 TRIM61Q5EBN2 209 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 ZRANB3Q5FWF4 1079 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 RBM20Q5T481 1227 aaKnown RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 ZNF549Q6P9A3 640 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 CNSTQ6PJW8 725 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 ADGRD1Q6QNK2 874 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 LRRC6Q86X45 466 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 TDRPQ86YL5 185 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 CILP2Q8IUL8 1156 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 SLC41A1Q8IVJ1 513 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 DEFB119Q8N690 84 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 PLA2G15Q8NCC3 412 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 GPR150Q8NGU9 434 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 OR4L1Q8NH43 312 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 OR14C36Q8NHC7 312 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 CXorf40AQ8TE69 158 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 GANCQ8TET4 914 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 NAT14Q8WUY8 206 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 SGSM3Q96HU1 749 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 PLEKHG4BQ96PX9 1271 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 SH3GL2Q99962 352 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 C19orf43Q9BQ61 176 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 FAM167BQ9BTA0 163 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 RIOK2Q9BVS4 552 aaKnown RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 TMBIM4Q9HC24 238 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 PPANQ9NQ55 473 aaKnown RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 WSB2Q9NYS7 404 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 ZFATQ9P243 1243 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 PSMC3IPQ9P2W1 217 aaPredicted RBP7.98□□□□□ -1.13
PCDH9-205ENST00000614931 LGALS13Q9UHV8 139 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 FZD4Q9ULV1 537 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 SCML1Q9UN30 329 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 SDK1Q7Z5N4 2213 aa7.98□□□□□ -1.13
PCDH9-205ENST00000614931 GON4LQ3T8J9 2241 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 A0A1W2PQU0 124 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 FAM47DPA6NHR8 397 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 AGAP14A8MT82 685 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 WNT9AO14904 365 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 ATP8B1O43520 1251 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 LZTS3O60299 673 aaPredicted RBP7.97□□□□□ -1.13
PCDH9-205ENST00000614931 OR1I1O60431 355 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 NDUFS2O75306 463 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 HAUS5O94927 633 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 SYF2O95926 243 aaKnown RBP7.97□□□□□ -1.13
PCDH9-205ENST00000614931 AHSGP02765 367 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 OGNP20774 298 aaKnown RBP7.97□□□□□ -1.13
PCDH9-205ENST00000614931 NFKBIAP25963 317 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 CD6P30203 668 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 OXTRP30559 389 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 IGFALSP35858 605 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 GP5P40197 560 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 LIMK2P53671 638 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 CSE1LP55060 971 aaKnown RBP7.97□□□□□ -1.13
PCDH9-205ENST00000614931 EIF3BP55884 814 aaKnown RBP7.97□□□□□ -1.13
PCDH9-205ENST00000614931 B4GALNT1Q00973 533 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 CACNG1Q06432 222 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 NFATC2Q13469 925 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 NAB1Q13506 487 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 IRF4Q15306 451 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 DUOXA1Q1HG43 343 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 WSCD2Q2TBF2 565 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 ZNF284Q2VY69 593 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 TNFAIP8L3Q5GJ75 292 aa7.97□□□□□ -1.13
PCDH9-205ENST00000614931 ZNF648Q5T619 568 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms