RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 PSMA3P25788 255 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 AKT1P31749 480 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 UGT1A3P35503 534 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 UGT1A5P35504 534 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 ITGA8P53708 1063 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 CRADDP78560 199 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 MRPS25P82663 173 aaKnown RBP13.14□□□□□ -0.31
MDC1-209ENST00000613547 XIAPP98170 497 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 CACNG1Q06432 222 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 ILF3Q12906 894 aaKnown RBP eCLIP13.14□□□□□ -0.31
MDC1-209ENST00000613547 SHBQ15464 509 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 PRRT3Q5FWE3 981 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 AFTPHQ6ULP2 937 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 MARK2Q7KZI7 788 aaKnown RBP13.14□□□□□ -0.31
MDC1-209ENST00000613547 TAS2R42Q7RTR8 314 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 CAND1Q86VP6 1230 aaKnown RBP13.14□□□□□ -0.31
MDC1-209ENST00000613547 GATAD2AQ86YP4 633 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 GALNT13Q8IUC8 556 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 RBFAQ8N0V3 343 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 SDR16C5Q8N3Y7 309 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 ZNF548Q8NEK5 533 aaPredicted RBP13.14□□□□□ -0.31
MDC1-209ENST00000613547 DDHD1Q8NEL9 900 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 LMX1AQ8TE12 382 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 SETD7Q8WTS6 366 aaKnown RBP13.14□□□□□ -0.31
MDC1-209ENST00000613547 HEXDCQ8WVB3 486 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 KIFC1Q9BW19 673 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 DPH5Q9H2P9 285 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 SLC32A1Q9H598 525 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 SUDS3Q9H7L9 328 aaPredicted RBP13.14□□□□□ -0.31
MDC1-209ENST00000613547 UGT1A7Q9HAW7 530 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 UGT1A10Q9HAW8 530 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 UGT1A8Q9HAW9 530 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 CHRAC1Q9NRG0 131 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 SYBUQ9NX95 663 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 WHRNQ9P202 907 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 CNOT6Q9ULM6 557 aaKnown RBP13.14□□□□□ -0.31
MDC1-209ENST00000613547 SUFUQ9UMX1 484 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 SOX13Q9UN79 622 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 DOLKQ9UPQ8 538 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 SNX24Q9Y343 169 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 MAD1L1Q9Y6D9 718 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 CSNK1G3Q9Y6M4 447 aa13.14□□□□□ -0.31
MDC1-209ENST00000613547 CFAP99D6REC4 459 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 CCL22O00626 93 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 GAPDHSO14556 408 aaPredicted RBP13.13□□□□□ -0.31
MDC1-209ENST00000613547 CDK14O94921 469 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 ANXA6P08133 673 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 CD59P13987 128 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 MSH3P20585 1137 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 DEKP35659 375 aaKnown RBP13.13□□□□□ -0.31
MDC1-209ENST00000613547 PPARGP37231 505 aaPredicted RBP13.13□□□□□ -0.31
MDC1-209ENST00000613547 MAGEA3P43357 314 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 RPL21P46778 160 aaKnown RBP13.13□□□□□ -0.31
MDC1-209ENST00000613547 GNPDA1P46926 289 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 POLD2P49005 469 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 ARL4CP56559 192 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 ACVR1Q04771 509 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 BNIP3Q12983 259 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 PEX6Q13608 980 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 LRP8Q14114 963 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 RSPO4Q2I0M5 234 aaPredicted RBP13.13□□□□□ -0.31
MDC1-209ENST00000613547 GPRC6AQ5T6X5 926 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 HIBCHQ6NVY1 386 aaPredicted RBP13.13□□□□□ -0.31
MDC1-209ENST00000613547 GKN2Q86XP6 184 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 NAXDQ8IW45 347 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 NXPE1Q8N323 547 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 MMGT1Q8N4V1 131 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 OR6P1Q8NGX9 317 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 RHBDD1Q8TEB9 315 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 SCG3Q8WXD2 468 aaKnown RBP13.13□□□□□ -0.31
MDC1-209ENST00000613547 HDAC10Q969S8 669 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 DCUN1D1Q96GG9 259 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 OR2M4Q96R27 311 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 COPS8Q99627 209 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 RTKNQ9BST9 563 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 NAT9Q9BTE0 207 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 LRRC61Q9BV99 259 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 OR2AG1Q9H205 316 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 MRPL40Q9NQ50 206 aaKnown RBP13.13□□□□□ -0.31
MDC1-209ENST00000613547 TRNAU1APQ9NX07 287 aaKnown RBP13.13□□□□□ -0.31
MDC1-209ENST00000613547 ZNHIT2Q9UHR6 403 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 KLF15Q9UIH9 416 aa13.13□□□□□ -0.31
MDC1-209ENST00000613547 OAS3Q9Y6K5 1087 aaKnown RBP13.13□□□□□ -0.31
MDC1-209ENST00000613547 FAM237BA0A1B0GVD1 139 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 CCDC162PA2VCL2 907 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 AGAP14A8MT82 685 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 LMO7DNF2Z398 122 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 SCAMP1O15126 338 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 POLBP06746 335 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 ARSDP51689 593 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 CAV1Q03135 178 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 TMEM115Q12893 351 aaPredicted RBP13.12□□□□□ -0.31
MDC1-209ENST00000613547 C1orf61Q13536 156 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 HIF1AQ16665 826 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 GLE1Q53GS7 698 aaKnown RBP13.12□□□□□ -0.31
MDC1-209ENST00000613547 FASTKD1Q53R41 847 aaKnown RBP13.12□□□□□ -0.31
MDC1-209ENST00000613547 AARS2Q5JTZ9 985 aaKnown RBP13.12□□□□□ -0.31
MDC1-209ENST00000613547 LYPLAL1Q5VWZ2 237 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 DUPD1Q68J44 220 aa13.12□□□□□ -0.31
MDC1-209ENST00000613547 DBX2Q6ZNG2 339 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms