RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 LRRN4Q8WUT4 740 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 ELMO2Q96JJ3 720 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 PLEKHG4BQ96PX9 1271 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 RUFY1Q96T51 708 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 HERPUD2Q9BSE4 406 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 TDRD1Q9BXT4 1180 aaKnown RBP23.15■■□□□ 1.3
MMP28-203ENST00000612672 TRIM55Q9BYV6 548 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 PCDH18Q9HCL0 1135 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 DTLQ9NZJ0 730 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 ADGRG1Q9Y653 693 aa23.15■■□□□ 1.3
MMP28-203ENST00000612672 LILRA5A6NI73 299 aa23.14■■□□□ 1.29
MMP28-203ENST00000612672 MFSD11O43934 449 aa23.14■■□□□ 1.29
MMP28-203ENST00000612672 KIAA0754O94854 1291 aa23.14■■□□□ 1.29
MMP28-203ENST00000612672 TYRP1P17643 537 aa23.14■■□□□ 1.29
MMP28-203ENST00000612672 ARL4AP40617 200 aa23.14■■□□□ 1.29
MMP28-203ENST00000612672 FAM182AQ5T1J6 154 aa23.14■■□□□ 1.29
MMP28-203ENST00000612672 ALG1LQ6GMV1 187 aa23.14■■□□□ 1.29
MMP28-203ENST00000612672 CAPRIN2Q6IMN6 1127 aaKnown RBP23.14■■□□□ 1.29
MMP28-203ENST00000612672 C6orf15Q6UXA7 325 aaPredicted RBP23.14■■□□□ 1.29
MMP28-203ENST00000612672 ATCAYQ86WG3 371 aa23.14■■□□□ 1.29
MMP28-203ENST00000612672 BBS5Q8N3I7 341 aa23.14■■□□□ 1.29
MMP28-203ENST00000612672 ZNF653Q96CK0 615 aa23.14■■□□□ 1.29
MMP28-203ENST00000612672 PLEKHB1Q9UF11 243 aaPredicted RBP23.14■■□□□ 1.29
MMP28-203ENST00000612672 CACNA1DQ01668 2161 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 CDC14CA4D256 554 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 MKRN2OSH3BPM6 223 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 DDX3XO00571 662 aaKnown RBP eCLIP23.13■■□□□ 1.29
MMP28-203ENST00000612672 KIF1CO43896 1103 aaKnown RBP23.13■■□□□ 1.29
MMP28-203ENST00000612672 TIAF1O95411 115 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 FTLP02792 175 aaPredicted RBP23.13■■□□□ 1.29
MMP28-203ENST00000612672 PYGLP06737 847 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 IL4RP24394 825 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 PCK1P35558 622 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 ITKQ08881 620 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 NIPAL4Q0D2K0 466 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 MMRN1Q13201 1228 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 ARRDC2Q8TBH0 407 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 SH3KBP1Q96B97 665 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 TGM7Q96PF1 710 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 OR6C1Q96RD1 312 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 STN1Q9H668 368 aaKnown RBP23.13■■□□□ 1.29
MMP28-203ENST00000612672 ATXN10Q9UBB4 475 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 SLC23A2Q9UGH3 650 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 POLHQ9Y253 713 aa23.13■■□□□ 1.29
MMP28-203ENST00000612672 KIR2DS5A0A0G2JLQ3 304 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 A0A0G2JNG1 304 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 LRRC53A6NM62 1247 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 KIR2DS3K7RE56 304 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 NUAK1O60285 661 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 KATNA1O75449 491 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 RFPL1O75677 317 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 CD48P09326 243 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 ZNF8P17098 575 aaPredicted RBP23.12■■□□□ 1.29
MMP28-203ENST00000612672 SPINT3P49223 89 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 PMS2P54278 862 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 KIR2DS5Q14953 304 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 PLXDC1Q8IUK5 500 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 LPCAT1Q8NF37 534 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 MAML1Q92585 1016 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 RSC1A1Q92681 617 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 EID2BQ96D98 161 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 POLR1EQ9GZS1 481 aaKnown RBP23.12■■□□□ 1.29
MMP28-203ENST00000612672 HAUS4Q9H6D7 363 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 AKIRIN1Q9H9L7 192 aaPredicted RBP23.12■■□□□ 1.29
MMP28-203ENST00000612672 ZNF624Q9P2J8 865 aaPredicted RBP23.12■■□□□ 1.29
MMP28-203ENST00000612672 RCOR3Q9P2K3 495 aaPredicted RBP23.12■■□□□ 1.29
MMP28-203ENST00000612672 MYO1AQ9UBC5 1043 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 CREBBPQ92793 2442 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 ESPL1Q14674 2120 aa23.12■■□□□ 1.29
MMP28-203ENST00000612672 TEP1Q99973 2627 aaKnown RBP23.11■■□□□ 1.29
MMP28-203ENST00000612672 LRRC10BA6NIK2 292 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 GRID2O43424 1007 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 NDUFA10O95299 355 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 SLC19A1P41440 591 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 EPHB1P54762 984 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 SLC25A11Q02978 314 aaKnown RBP23.11■■□□□ 1.29
MMP28-203ENST00000612672 PLA2G4EQ3MJ16 856 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 NSMCE1Q8WV22 266 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 BTBD6Q96KE9 485 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 LYSMD1Q96S90 227 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.11■■□□□ 1.29
MMP28-203ENST00000612672 EPB41L1Q9H4G0 881 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 ZNF768Q9H5H4 540 aaKnown RBP23.11■■□□□ 1.29
MMP28-203ENST00000612672 KLC4Q9NSK0 619 aa23.11■■□□□ 1.29
MMP28-203ENST00000612672 GOLGA6L3A6NEY3 463 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 SEMA7AO75326 666 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 UBXN7O94888 489 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 PPP1CAP62136 330 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 CPZQ66K79 652 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 TMEM26Q6ZUK4 368 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 CT55Q8WUE5 264 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 STAMBPL1Q96FJ0 436 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 TWSG1Q9GZX9 223 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 OR2AG1Q9H205 316 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 TTLL3Q9Y4R7 772 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 PCDHB3Q9Y5E6 796 aa23.1■■□□□ 1.29
MMP28-203ENST00000612672 DOPEY1Q5JWR5 2465 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 C1orf232A0A0U1RR37 186 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 CREG1O75629 220 aa23.09■■□□□ 1.29
MMP28-203ENST00000612672 HLA-DQB2P05538 268 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms