RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 NELL1Q92832 810 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 PKNOX2Q96KN3 472 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 SPACA7Q96KW9 195 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 PAFAH2Q99487 392 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 TTC1Q99614 292 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 GPR174Q9BXC1 333 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 FAM126AQ9BYI3 521 aaPredicted RBP15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 FAM96AQ9H5X1 160 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 C6orf106Q9H6K1 298 aaPredicted RBP15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 INTS10Q9NVR2 710 aaKnown RBP15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 CNOT6Q9ULM6 557 aaKnown RBP15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 VPS9D1Q9Y2B5 631 aa15.85■□□□□ 0.13
CLTCL1-207ENST00000611723 IGLV3-16A0A075B6K0 115 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 METTL12A8MUP2 240 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 FADS2P1A8MWK0 482 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 POC1B-GALNT4F8VUJ3 575 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 RASGRF2O14827 1237 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 PFDN6O15212 129 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 SASH3O75995 380 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 IGHV4-34P06331 123 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 ACRV1P26436 265 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 PMLP29590 882 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 GPR1P46091 355 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 SERPINB9P50453 376 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 ADARP55265 1226 aaKnown RBP15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 CSTF1Q05048 431 aaKnown RBP15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 ZNF844Q08AG5 666 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 RNF187Q5TA31 235 aaPredicted RBP15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 TSSK4Q6SA08 328 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 PACS1Q6VY07 963 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 TAS2R42Q7RTR8 314 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 STRA8Q7Z7C7 330 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 SERPINA9Q86WD7 417 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 PELI3Q8N2H9 469 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 RIBC1Q8N443 379 aaPredicted RBP15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 FAM160A2Q8N612 972 aaPredicted RBP15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 HEXDCQ8WVB3 486 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 DCAKDQ8WVC6 231 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 KLK6Q92876 244 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 MBNL1Q9NR56 388 aaKnown RBP15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 ZDHHC3Q9NYG2 299 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 EURLQ9NYK6 297 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 SLC17A6Q9P2U8 582 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 CRLS1Q9UJA2 301 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 DMTF1Q9Y222 760 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 FNDC3AQ9Y2H6 1198 aaKnown RBP15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 PSAT1Q9Y617 370 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 HS3ST3A1Q9Y663 406 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 DCHS1Q96JQ0 3298 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 MYO15AQ9UKN7 3530 aa15.84■□□□□ 0.13
CLTCL1-207ENST00000611723 EP300Q09472 2414 aaPredicted RBP15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 AGPSO00116 658 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 RAD51BO15315 384 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 SLC31A1O15431 190 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 NDUFS2O75306 463 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 CDH16O75309 829 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 NDUFS3O75489 264 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 HAUS5O94927 633 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 INHBAP08476 426 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 HOXC4P09017 264 aaPredicted RBP15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 HNRNPA2B1P22626 353 aaKnown RBP15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 MAT2AP31153 395 aaKnown RBP15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 SPRP35270 261 aaPredicted RBP15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 PTGER3P43115 390 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 FNTBP49356 437 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 MPP1Q00013 466 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 IRF4Q15306 451 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 SMAD1Q15797 465 aaKnown RBP15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 DBN1Q16643 649 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 ZNF528Q3MIS6 628 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 RAET1GQ6H3X3 334 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 LDB1Q86U70 411 aaPredicted RBP15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 ZC3HC1Q86WB0 502 aaKnown RBP15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 OTUD6BQ8N6M0 293 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 DDHD1Q8NEL9 900 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 GLYATL1Q969I3 302 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 BIRC7Q96CA5 298 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 RBBP8Q99708 897 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 TEX101Q9BY14 249 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 RHOJQ9H4E5 214 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 EBF2Q9HAK2 575 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 TXNDC16Q9P2K2 825 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 IKBKGQ9Y6K9 419 aa15.83■□□□□ 0.12
CLTCL1-207ENST00000611723 CACNA1AO00555 2505 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 K7ESM1 405 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 TOR1BO14657 336 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 GPR39O43194 453 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 FAM155BO75949 473 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 RPS3P23396 243 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 CNTFP26441 200 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 CD151P48509 253 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 POLD2P49005 469 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 LDLRAP1Q5SW96 308 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 GPRC6AQ5T6X5 926 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 LGSNQ5TDP6 509 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 C11orf74Q86VG3 221 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 PNPLA1Q8N8W4 532 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 PLA2G15Q8NCC3 412 aa15.82■□□□□ 0.12
CLTCL1-207ENST00000611723 EPS8L3Q8TE67 593 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms