RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ZBTB17Q13105 803 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 GALNT3Q14435 633 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 ATG14Q6ZNE5 492 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 H2AFVQ71UI9 128 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 LYSMD3Q7Z3D4 306 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 ARHGAP22Q7Z5H3 698 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 SLC9B2Q86UD5 537 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 CNTD1Q8N815 330 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 CTNNBL1Q8WYA6 563 aaPredicted RBP13.02□□□□□ -0.33
RPS28-204ENST00000602140 RAPGEF5Q92565 580 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 SH3KBP1Q96B97 665 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 EID2BQ96D98 161 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 ZNF830Q96NB3 372 aaPredicted RBP13.02□□□□□ -0.33
RPS28-204ENST00000602140 RNF157Q96PX1 679 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 TEFMQ96QE5 360 aaKnown RBP13.02□□□□□ -0.33
RPS28-204ENST00000602140 CTRCQ99895 268 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 HERPUD2Q9BSE4 406 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 ADGRE3Q9BY15 652 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 CARD9Q9H257 536 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 ARFGAP3Q9NP61 516 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 GEMIN8Q9NWZ8 242 aaKnown RBP13.02□□□□□ -0.33
RPS28-204ENST00000602140 IFNKQ9P0W0 207 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 ATXN10Q9UBB4 475 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 PILRAQ9UKJ1 303 aa13.02□□□□□ -0.33
RPS28-204ENST00000602140 GOLGA6L19H0YKK7 550 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 SUV39H1O43463 412 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 NUAK1O60285 661 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 PPFIA2O75334 1257 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 SLC2A4P14672 509 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 ZNF8P17098 575 aaPredicted RBP13.01□□□□□ -0.33
RPS28-204ENST00000602140 IFI35P80217 286 aaPredicted RBP13.01□□□□□ -0.33
RPS28-204ENST00000602140 MC2RQ01718 297 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 PPIDQ08752 370 aaKnown RBP13.01□□□□□ -0.33
RPS28-204ENST00000602140 ZNF648Q5T619 568 aaPredicted RBP13.01□□□□□ -0.33
RPS28-204ENST00000602140 ALS2CLQ60I27 953 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 BORAQ6PGQ7 559 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 KDELC2Q7Z4H8 507 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 RTP4Q96DX8 246 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 SPATA16Q9BXB7 569 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 TBC1D10AQ9BXI6 508 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 CEP41Q9BYV8 373 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 SLC25A18Q9H1K4 315 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 OR2AG1Q9H205 316 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 ZFYVE1Q9HBF4 777 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 PRDM8Q9NQV8 689 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 CPNE7Q9UBL6 633 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 KLHL3Q9UH77 587 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 IL17BQ9UHF5 180 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 SHOC2Q9UQ13 582 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 HEY1Q9Y5J3 304 aa13.01□□□□□ -0.33
RPS28-204ENST00000602140 ZFC3H1O60293 1989 aaKnown RBP13.01□□□□□ -0.33
RPS28-204ENST00000602140 KIR2DS5A0A0G2JLQ3 304 aa13□□□□□ -0.33
RPS28-204ENST00000602140 A0A0G2JNG1 304 aa13□□□□□ -0.33
RPS28-204ENST00000602140 LRRD1A4D1F6 860 aa13□□□□□ -0.33
RPS28-204ENST00000602140 OR5K4A6NMS3 321 aa13□□□□□ -0.33
RPS28-204ENST00000602140 KIR2DS3K7RE56 304 aa13□□□□□ -0.33
RPS28-204ENST00000602140 TERTO14746 1132 aaKnown RBP13□□□□□ -0.33
RPS28-204ENST00000602140 SLC25A14O95258 325 aaPredicted RBP13□□□□□ -0.33
RPS28-204ENST00000602140 PIRTP0C851 137 aa13□□□□□ -0.33
RPS28-204ENST00000602140 HNRNPH3P31942 346 aaKnown RBP13□□□□□ -0.33
RPS28-204ENST00000602140 MAN1A1P33908 653 aa13□□□□□ -0.33
RPS28-204ENST00000602140 EPHA4P54764 986 aa13□□□□□ -0.33
RPS28-204ENST00000602140 AP1B1Q10567 949 aa13□□□□□ -0.33
RPS28-204ENST00000602140 MESDQ14696 234 aa13□□□□□ -0.33
RPS28-204ENST00000602140 KIR2DS5Q14953 304 aa13□□□□□ -0.33
RPS28-204ENST00000602140 SLC18A3Q16572 532 aa13□□□□□ -0.33
RPS28-204ENST00000602140 ZNF569Q5MCW4 686 aa13□□□□□ -0.33
RPS28-204ENST00000602140 CEACAM20Q6UY09 585 aa13□□□□□ -0.33
RPS28-204ENST00000602140 PHYKPLQ8IUZ5 450 aa13□□□□□ -0.33
RPS28-204ENST00000602140 NLGN4XQ8N0W4 816 aa13□□□□□ -0.33
RPS28-204ENST00000602140 PLD5Q8N7P1 536 aa13□□□□□ -0.33
RPS28-204ENST00000602140 GPR26Q8NDV2 337 aa13□□□□□ -0.33
RPS28-204ENST00000602140 NLGN4YQ8NFZ3 816 aaPredicted RBP13□□□□□ -0.33
RPS28-204ENST00000602140 TRAF3IP1Q8TDR0 691 aaPredicted RBP13□□□□□ -0.33
RPS28-204ENST00000602140 TRIB3Q96RU7 358 aa13□□□□□ -0.33
RPS28-204ENST00000602140 LDHAL6BQ9BYZ2 381 aaPredicted RBP13□□□□□ -0.33
RPS28-204ENST00000602140 SPRY4Q9C004 299 aa13□□□□□ -0.33
RPS28-204ENST00000602140 ADNPQ9H2P0 1102 aa13□□□□□ -0.33
RPS28-204ENST00000602140 OSGEPL1Q9H4B0 414 aa13□□□□□ -0.33
RPS28-204ENST00000602140 TRIM39Q9HCM9 518 aa13□□□□□ -0.33
RPS28-204ENST00000602140 APMAPQ9HDC9 416 aa13□□□□□ -0.33
RPS28-204ENST00000602140 FBXO8Q9NRD0 319 aa13□□□□□ -0.33
RPS28-204ENST00000602140 KLC4Q9NSK0 619 aa13□□□□□ -0.33
RPS28-204ENST00000602140 LCMT1Q9UIC8 334 aa13□□□□□ -0.33
RPS28-204ENST00000602140 ADGRG1Q9Y653 693 aa13□□□□□ -0.33
RPS28-204ENST00000602140 TLN1Q9Y490 2541 aaKnown RBP12.99□□□□□ -0.33
RPS28-204ENST00000602140 LOC101059948A0A1B0GTJ6 334 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 ZNF891A8MT65 544 aaPredicted RBP12.99□□□□□ -0.33
RPS28-204ENST00000602140 SLC4A1P02730 911 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 MAP4P27816 1152 aaKnown RBP12.99□□□□□ -0.33
RPS28-204ENST00000602140 CLCNKAP51800 687 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 PCSK7Q16549 785 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 SLC9A4Q6AI14 798 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 CRTC3Q6UUV7 619 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 TIPARPQ7Z3E1 657 aaKnown RBP12.99□□□□□ -0.33
RPS28-204ENST00000602140 TMC3Q7Z5M5 1100 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 ADGRG6Q86SQ4 1221 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 NT5DC3Q86UY8 548 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 UNC5BQ8IZJ1 945 aa12.99□□□□□ -0.33
RPS28-204ENST00000602140 KIAA1143Q96AT1 154 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms