RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 RPS3P23396 243 aaKnown RBP eCLIP17.86■□□□□ 0.45
VRK3-225ENST00000601912 DRD3P35462 400 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 SLC26A3P40879 764 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 PDAP1Q13442 181 aaKnown RBP17.86■□□□□ 0.45
VRK3-225ENST00000601912 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.86■□□□□ 0.45
VRK3-225ENST00000601912 CYP2U1Q7Z449 544 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 TMPRSS6Q8IU80 811 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 PLD6Q8N2A8 252 aaKnown RBP17.86■□□□□ 0.45
VRK3-225ENST00000601912 AADATQ8N5Z0 425 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 MAFAQ8NHW3 353 aaPredicted RBP17.86■□□□□ 0.45
VRK3-225ENST00000601912 RPLP0P6Q8NHW5 317 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 SCAMP4Q969E2 229 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 COQ10AQ96MF6 247 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 COPS8Q99627 209 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 P2RY12Q9H244 342 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 ZDHHC3Q9NYG2 299 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 TMEM216Q9P0N5 145 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 SCML1Q9UN30 329 aa17.86■□□□□ 0.45
VRK3-225ENST00000601912 NDRG2Q9UN36 371 aaKnown RBP17.86■□□□□ 0.45
VRK3-225ENST00000601912 RUVBL2Q9Y230 463 aaKnown RBP17.86■□□□□ 0.45
VRK3-225ENST00000601912 A0A1W2PQF6 199 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 GMNCA6NCL1 334 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 E5RI56 91 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 H3BMM5 538 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 TSPAN6O43657 245 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 PLIN3O60664 434 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 KLHL2O95198 593 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 APOA4P06727 396 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 NEFHP12036 1026 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 CD72P21854 359 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 CD9P21926 228 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 SERPINB4P48594 390 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 PDK4Q16654 411 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 FAM83EQ2M2I3 478 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 HENMT1Q5T8I9 393 aaKnown RBP17.85■□□□□ 0.45
VRK3-225ENST00000601912 AGAP9Q5VTM2 703 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 PTRHD1Q6GMV3 140 aaKnown RBP17.85■□□□□ 0.45
VRK3-225ENST00000601912 UGT3A1Q6NUS8 523 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 C16orf46Q6P387 395 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 GANCQ8TET4 914 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 KCTD4Q8WVF5 259 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 AP2M1Q96CW1 435 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 DTD2Q96FN9 168 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 RIOK2Q9BVS4 552 aaKnown RBP17.85■□□□□ 0.45
VRK3-225ENST00000601912 C1QTNF1Q9BXJ1 281 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 MKRN2Q9H000 416 aaKnown RBP17.85■□□□□ 0.45
VRK3-225ENST00000601912 EPN3Q9H201 632 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 NMRAL1Q9HBL8 299 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 SYTL2Q9HCH5 934 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 SMOXQ9NWM0 555 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 GNPTGQ9UJJ9 305 aa17.85■□□□□ 0.45
VRK3-225ENST00000601912 A0A1W2PP55 124 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 WDR91A4D1P6 747 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 SHISA7A6NL88 538 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 MMP20O60882 483 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 RNASEH2AO75792 299 aaKnown RBP17.84■□□□□ 0.45
VRK3-225ENST00000601912 C6P13671 934 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 CHRM3P20309 590 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 SKIV2L2P42285 1042 aaKnown RBP17.84■□□□□ 0.45
VRK3-225ENST00000601912 NSG1P42857 185 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 PGGT1BP53609 377 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 PRKCQQ04759 706 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 ZBTB16Q05516 673 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 SFSWAPQ12872 951 aaKnown RBP17.84■□□□□ 0.45
VRK3-225ENST00000601912 CTSL3PQ5NE16 218 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 AGBL4Q5VU57 503 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 KLC3Q6P597 504 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 ZNF765Q7L2R6 523 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 LRRC8CQ8TDW0 803 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 KCNJ9Q92806 393 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 CHMP6Q96FZ7 201 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 ABCG8Q9H221 673 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 ZNF358Q9NW07 568 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 FBXL12Q9NXK8 326 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 KCTD5Q9NXV2 234 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 MID2Q9UJV3 735 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 EMCNQ9ULC0 261 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 SORCS3Q9UPU3 1222 aa17.84■□□□□ 0.45
VRK3-225ENST00000601912 BIRC5O15392 142 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 DNAJC6O75061 913 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 RECQL5O94762 991 aaPredicted RBP17.83■□□□□ 0.45
VRK3-225ENST00000601912 PROCP04070 461 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 LTA4HP09960 611 aaKnown RBP17.83■□□□□ 0.45
VRK3-225ENST00000601912 CCDC166P0CW27 439 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 COL9A1P20849 921 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 GMPRP36959 345 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 IRX4P78413 519 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 CREB5Q02930 508 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 CSHL1Q14406 222 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 TTC31Q49AM3 519 aaPredicted RBP17.83■□□□□ 0.45
VRK3-225ENST00000601912 SETMARQ53H47 684 aaPredicted RBP17.83■□□□□ 0.45
VRK3-225ENST00000601912 PIM3Q86V86 326 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 TRIM42Q8IWZ5 723 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 CENPLQ8N0S6 344 aaPredicted RBP17.83■□□□□ 0.45
VRK3-225ENST00000601912 NXNL1Q96CM4 212 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 NUS1Q96E22 293 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 DCUN1D1Q96GG9 259 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 SCYL1Q96KG9 808 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 UBXN10Q96LJ8 280 aa17.83■□□□□ 0.45
VRK3-225ENST00000601912 TRMT6Q9UJA5 497 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms