RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 HOOK3Q86VS8 718 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 HID1Q8IV36 788 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 PHACTR4Q8IZ21 702 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 PNPLA1Q8N8W4 532 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 BAHD1Q8TBE0 780 aaPredicted RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 CCDC97Q96F63 343 aaPredicted RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 TRIM56Q9BRZ2 755 aaKnown RBP13.62□□□□□ -0.23
VRK3-219ENST00000600137 ERP44Q9BS26 406 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 LRRC61Q9BV99 259 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 IL22Q9GZX6 179 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 TRIM39Q9HCM9 518 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 SMOXQ9NWM0 555 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 SYBUQ9NX95 663 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 BFARQ9NZS9 450 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 ATXN10Q9UBB4 475 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 KLQ9UEF7 1012 aa13.62□□□□□ -0.23
VRK3-219ENST00000600137 CCDC162PA2VCL2 907 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 AP3B1O00203 1094 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 CHUKO15111 745 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 SCAMP1O15126 338 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 YKT6O15498 198 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 SH3BP5O60239 455 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 MTX2O75431 263 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 SLC25A14O95258 325 aaPredicted RBP13.61□□□□□ -0.23
VRK3-219ENST00000600137 ZNF8P17098 575 aaPredicted RBP13.61□□□□□ -0.23
VRK3-219ENST00000600137 KELP23276 732 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 ARNTP27540 789 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 NMBRP28336 390 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 HADHAP40939 763 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 B4GALNT1Q00973 533 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 CKAP4Q07065 602 aaKnown RBP13.61□□□□□ -0.23
VRK3-219ENST00000600137 NFATC2Q13469 925 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 SEPT6Q14141 434 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 SKIDA1Q1XH10 827 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 PYCR3Q53H96 274 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 FNBP1LQ5T0N5 605 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 MAATS1Q7Z4T9 603 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 NRROSQ86YC3 692 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 PIANPQ8IYJ0 282 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 MMGT1Q8N4V1 131 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 NOA1Q8NC60 698 aaKnown RBP13.61□□□□□ -0.23
VRK3-219ENST00000600137 ZNF548Q8NEK5 533 aaPredicted RBP13.61□□□□□ -0.23
VRK3-219ENST00000600137 DDHD1Q8NEL9 900 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 CCL4L1Q8NHW4 92 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 PEX13Q92968 403 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 PWWP2AQ96N64 755 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 CAMK1GQ96NX5 476 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 LRRC1Q9BTT6 524 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 TMEM168Q9H0V1 697 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 ASB8Q9H765 288 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 PLAC1Q9HBJ0 212 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 MRM3Q9HC36 420 aaKnown RBP13.61□□□□□ -0.23
VRK3-219ENST00000600137 CYP4F12Q9HCS2 524 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 XAB2Q9HCS7 855 aaKnown RBP13.61□□□□□ -0.23
VRK3-219ENST00000600137 GRHL1Q9NZI5 618 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 VPS18Q9P253 973 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 APPL1Q9UKG1 709 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 SUFUQ9UMX1 484 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 SOX13Q9UN79 622 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 SNX24Q9Y343 169 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 PLEKHM1Q9Y4G2 1056 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 CSNK1G3Q9Y6M4 447 aa13.61□□□□□ -0.23
VRK3-219ENST00000600137 GOLGA4Q13439 2230 aaKnown RBP13.61□□□□□ -0.23
VRK3-219ENST00000600137 ZFC3H1O60293 1989 aaKnown RBP13.6□□□□□ -0.23
VRK3-219ENST00000600137 OR51F1A6NGY5 319 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 EFCAB8A8MWE9 144 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 TRIM38O00635 465 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 SGTAO43765 313 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 NUAK1O60285 661 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 RASGRP1O95267 797 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 PRAMEF1O95521 474 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 TNFP01375 233 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 MC4RP32245 332 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 FOXN2P32314 431 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 ITGA8P53708 1063 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 SARNPP82979 210 aaKnown RBP13.6□□□□□ -0.23
VRK3-219ENST00000600137 TMEM115Q12893 351 aaPredicted RBP13.6□□□□□ -0.23
VRK3-219ENST00000600137 C1orf61Q13536 156 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 MORF4L2Q15014 288 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 PRRT3Q5FWE3 981 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 GPRC6AQ5T6X5 926 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 DOK6Q6PKX4 331 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 CES3Q6UWW8 571 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 NLRP9Q7RTR0 991 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 RD3Q7Z3Z2 195 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 SNX20Q7Z614 316 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 C11orf96Q7Z7L8 435 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 PCGF5Q86SE9 256 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 TMEM135Q86UB9 458 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 ZNF547Q8IVP9 402 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 IGDCC3Q8IVU1 814 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 GPBAR1Q8TDU6 330 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 SEC14L1Q92503 715 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 HDAC10Q969S8 669 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 MFSD3Q96ES6 412 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 SNF8Q96H20 258 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 SGSM3Q96HU1 749 aa13.6□□□□□ -0.23
VRK3-219ENST00000600137 FCRL3Q96P31 734 aaPredicted RBP13.6□□□□□ -0.23
VRK3-219ENST00000600137 WDR83Q9BRX9 315 aaKnown RBP13.6□□□□□ -0.23
VRK3-219ENST00000600137 TRIM31Q9BZY9 425 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms