RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 GLRX5Q86SX6 157 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 GALNT13Q8IUC8 556 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 KLHL7Q8IXQ5 586 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 KLHDC8BQ8IXV7 354 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 FAM46DQ8NEK8 389 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 COX14Q96I36 57 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 PLEKHG4BQ96PX9 1271 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 DUSP23Q9BVJ7 150 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 CDH19Q9H159 772 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 FAM96AQ9H5X1 160 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 ARNT2Q9HBZ2 717 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 IL26Q9NPH9 171 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 FEZ2Q9UHY8 353 aaPredicted RBP10.99□□□□□ -0.65
LIG1-211ENST00000596457 FKBPLQ9UIM3 349 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 GPR34Q9UPC5 381 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 WASF3Q9UPY6 502 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 NEUROG3Q9Y4Z2 214 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 DGKBQ9Y6T7 804 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 COL5A1P20908 1838 aaPredicted RBP10.99□□□□□ -0.65
LIG1-211ENST00000596457 PLXNB3Q9ULL4 1909 aa10.99□□□□□ -0.65
LIG1-211ENST00000596457 ZNF106Q9H2Y7 1883 aaKnown RBP10.98□□□□□ -0.65
LIG1-211ENST00000596457 CPED1A4D0V7 1026 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 FAM221BA6H8Z2 402 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 ERI2A8K979 691 aaKnown RBP10.98□□□□□ -0.65
LIG1-211ENST00000596457 B4DGG1 531 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 LMO7DNF2Z398 122 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 TOP3BO95985 862 aaKnown RBP10.98□□□□□ -0.65
LIG1-211ENST00000596457 PROS1P07225 676 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 IVLP07476 585 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 CKMT2P17540 419 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 ADCY8P40145 1251 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 SESN2P58004 480 aaPredicted RBP10.98□□□□□ -0.65
LIG1-211ENST00000596457 PDE1BQ01064 536 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 CTBSQ01459 385 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 ILF3Q12906 894 aaKnown RBP eCLIP10.98□□□□□ -0.65
LIG1-211ENST00000596457 MSLNQ13421 630 aaPredicted RBP10.98□□□□□ -0.65
LIG1-211ENST00000596457 ITGA9Q13797 1035 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 GTF2H3Q13889 308 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 PPP1R7Q15435 360 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 CYP1B1Q16678 543 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 PLA2G4EQ3MJ16 856 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 ZRANB3Q5FWF4 1079 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 ZDHHC20Q5W0Z9 365 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 SLC30A9Q6PML9 568 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 CRTC3Q6UUV7 619 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 PHYKPLQ8IUZ5 450 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 CHCHD4Q8N4Q1 142 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 ZNF398Q8TD17 642 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 GRK7Q8WTQ7 553 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 GLMNQ92990 594 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 GLYATL1Q969I3 302 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 TRIM44Q96DX7 344 aaPredicted RBP10.98□□□□□ -0.65
LIG1-211ENST00000596457 DNAJC1Q96KC8 554 aaKnown RBP10.98□□□□□ -0.65
LIG1-211ENST00000596457 TTC25Q96NG3 672 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 OR2M4Q96R27 311 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 GSDMCQ9BYG8 508 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 DDX47Q9H0S4 455 aaKnown RBP10.98□□□□□ -0.65
LIG1-211ENST00000596457 DPEP2Q9H4A9 486 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 ASB8Q9H765 288 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 ATXN10Q9UBB4 475 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 SLC17A4Q9Y2C5 497 aa10.98□□□□□ -0.65
LIG1-211ENST00000596457 TRBV23OR9-2A0A075B6M9 112 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 TCRBV7S3A2A0A539 114 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 TPP1O14773 563 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 GRID2O43424 1007 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 LDB2O43679 373 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 DNAJC6O75061 913 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 PPFIA2O75334 1257 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 SUN1O94901 812 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 CDK14O94921 469 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 PRAMEF1O95521 474 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 ECEL1O95672 775 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 ZNF8P17098 575 aaPredicted RBP10.97□□□□□ -0.65
LIG1-211ENST00000596457 SPINK2P20155 84 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 AKT1P31749 480 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 CA5AP35218 305 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 HADHAP40939 763 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 ACTR1BP42025 376 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 DUSP3P51452 185 aaPredicted RBP10.97□□□□□ -0.65
LIG1-211ENST00000596457 ACTR1AP61163 376 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 NR0B2Q15466 257 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 PROX2Q3B8N5 592 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 PYCR3Q53H96 274 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 C6orf132Q5T0Z8 1188 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 PDPK2PQ6A1A2 396 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 ZCCHC8Q6NZY4 707 aaKnown RBP10.97□□□□□ -0.65
LIG1-211ENST00000596457 DHRS13Q6UX07 377 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 TAS2R42Q7RTR8 314 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 ADGRG6Q86SQ4 1221 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 CREG2Q8IUH2 290 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 SFTPA2Q8IWL1 248 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 ADAMTS14Q8WXS8 1223 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 TBATAQ96M53 351 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 SCNM1Q9BWG6 230 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 TRIM39Q9HCM9 518 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 CASS4Q9NQ75 786 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 KCND1Q9NSA2 647 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 SPATS2LQ9NUQ6 558 aaKnown RBP10.97□□□□□ -0.65
LIG1-211ENST00000596457 EVA1BQ9NVM1 165 aa10.97□□□□□ -0.65
LIG1-211ENST00000596457 NFKBIL1Q9UBC1 381 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms